Resource Centre
94 results
Workflow: plasmid sequencing
- Bioinformatics
- Workflow
- EPI2ME
- EPI2ME Labs
- Bacteria
- Microbiology
- Infectious disease
August 15 2023
Workflow: AAV sequencing
- Workflow
- Microbiology
- Clinical research
- DNA
- MinION
- GridION
- Sample prep
- Library prep
- EPI2ME
- Bioinformatics
November 17 2023
Whole-genome analysis of VREfm isolates with daptomycin resistance using Oxford Nanopore and Illumina sequencing
- Bioinformatics
- Whole genome
- Clinical research
- Infectious disease
- Bacteria
- Microbiology
- AMR
- DNA
- Direct analysis
- EPI2ME
- MinION
June 20 2019
The wastewater microbiome: A novel insight for COVID-19 surveillance
- Bioinformatics
- Microbiology
- Microbiome
- Metagenomics
- Infectious disease
- Virus
- Bacteria
- Outbreak
- 16S
- Targeted
- Environment
- Amplicons
- Identification
- DNA
- MinION
- EPI2ME
- Water testing
October 9 2020
Virtual Nanopore Day, Switzerland
- Bioinformatics
- Human genomics
- Transcriptome
- Methylation
- EPI2ME
November 25 2020
Virtual Nanopore Day, Australia: Bioinformatics
- Bioinformatics
- Long-read
- Assembly
- Methylation
- PromethION
- EPI2ME
November 25 2020
Validating a molecular cloning experiment using de novo assembly of nanopore reads
- London Calling
- EPI2ME
- Plasmid
May 21 2024
Ultra-rich human data — variant analysis with EPI2ME
- Bioinformatics
- Human genomics
- Population genomics
- EPI2ME
- Epigenetics
- SNVs
- Phasing
- Structural variation
- Whole genome
September 17 2024
Towards ultra-rapid microbial cfDNA nanopore sequencing for the identification of sepsis-causing pathogens
- Bioinformatics
- Clinical research
- Infectious disease
- Metagenomics
- Microbiology
- Whole genome
- MinION
- Flongle
- EPI2ME
May 15 2022
Towards personalised medicine for breast cancer in the Caribbean: a pilot study
- Variant calling
- Cancer research
- Population genomics
- PromethION
- EPI2ME
- London Calling
May 24 2024
Talaromyces rugulosus ventriculitis diagnosed by nanopore amplicon sequencing, 2022
- Infectious disease
- Clinical research
- EPI2ME
- WIMP
- Microbiology
- Fungi
- Identification
June 4 2023
Showcase: Carrier screening
- Cancer research
- Clinical research
- Bioinformatics
- Human genomics
- Population genomics
- MinION
- GridION
- EPI2ME
- GridION Q
- SNVs
- Phasing
- Structural variation
- Targeted
September 17 2024
Secondary analysis update
- Bioinformatics
- EPI2ME
- Assembly
- SNVs
- Phasing
- Structural variation
- Whole genome
September 17 2024
Rhizomicrobiomics of Caesalpinia bonducella, a wonder plant for PCOS treatment
- Plant
- Bacteria
- Microbiology
- Microbiome
- Metagenomics
- Identification
- Long-read
- EPI2ME
- MinION
- gDNA
- DNA
January 17 2021
Rapid identification of pathogens, antibiotic resistance genes and plasmids in blood cultures by nanopore sequencing
- Bioinformatics
- Clinical research
- Microbiology
- Real-time
- Portable
- Bacteria
- AMR
- Whole genome
- DNA
- gDNA
- Long-read
- Assembly
- MinION
- EPI2ME
- WIMP
July 17 2020
Rapid identification, capsular typing and molecular characterization of Streptococcus pneumoniae by using whole genome nanopore sequencing
- Bioinformatics
- Microbiology
- Whole genome
- Identification
- MinION
- gDNA
- DNA
- Clinical research
- EPI2ME
- WIMP
November 13 2020
Rapid diagnostics of orthopaedic-implant-associated infections using Nanopore shotgun metagenomic sequencing on tissue biopsies
- Bioinformatics
- Microbiology
- Identification
- DNA
- AMR
- Metagenomics
- Clinical research
- EPI2ME
- MinION
- gDNA
- Infectious disease
January 4 2021
Rapid diagnosis of bacterial meningitis by nanopore 16S amplicon sequencing: A pilot study
- Microbiology
- Bacteria
- 16S
- MinION
- DNA
- Targeted
- Amplicons
- Clinical research
- EPI2ME
August 12 2019
Rapid and real-time identification of fungi up to the species level with long amplicon nanopore sequencing from clinical samples
- Bioinformatics
- Microbiology
- Fungi
- Identification
- WIMP
- EPI2ME
- Targeted
- 16S
- Long-read
- MinION
- Microbiome
- Metagenomics
- Clinical research
December 23 2020