Resource Centre
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Zoonotic spill-over of SARS-CoV-2: mink-adapted virus in humans
- Amplicons
- Infectious disease
- Microbiology
- RNA
- cDNA
March 10 2022
)
Zika virus amplification using strand displacement isothermal method and sequencing using nanopore technology
- Amplicons
- Microbiology
- Virus
- Whole genome
- Targeted
- MinION
May 5 2020
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Workflow: mpox virus sequencing
- Amplicons
- Assembly
- DNA
- EPI2ME
- Extraction
- Infectious disease
November 21 2022
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Whole-genome sequencing of SARS-CoV-2 in the Republic of Ireland during waves 1 and 2 of the pandemic
- Amplicons
- MinION
- GridION
- Microbiology
- Outbreak
- cDNA
February 10 2021
)
The wastewater microbiome: A novel insight for COVID-19 surveillance
- Amplicons
- Bioinformatics
- Microbiology
- Microbiome
- Metagenomics
- Infectious disease
October 9 2020
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Virus-derived variation in diverse human genomes
- Amplicons
- Microbiology
- Virus
- Targeted
- Structural variation
- Human genomics
November 20 2020
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Viral sequencing reveals US healthcare personnel rarely become infected with SARS-CoV-2 through patient contact
- Amplicons
- GridION
- Microbiology
- Outbreak
- cDNA
- RNA
February 1 2021
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Viral genetic sequencing identifies staff transmission of COVID-19 is important in a community hospital outbreak
- Amplicons
- MinION
- Microbiology
- Outbreak
- cDNA
- RNA
February 19 2021
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Verification of CRISPR editing by Xdrop™ Indirect Sequence Capture followed by short- and long- read sequencing
- Amplicons
- Targeted
- MinION
- Long-read
- DNA
May 30 2020
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Validation and application of multiplex nanopore MinION sequencing for molecular typing of human adenoviruses in clinical samples: a cost effective sequencing strategy
- Amplicons
- Virus
- Microbiology
- MinION
- Clinical research
- Infectious disease
April 29 2019
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Utilizing nanopore sequencing technology for the rapid and comprehensive characterization of eleven HLA loci; addressing the need for deceased donor expedited HLA typing
- Amplicons
- Human genomics
- SNVs
- Phasing
- DNA
- Targeted
June 25 2020
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Use of Oxford Nanopore MinION to generate full-length sequences of the Blastocystis small subunit (SSU) rRNA gene
- Amplicons
- Protist
- Microbiology
- 16S
- Targeted
- MinION
November 25 2020
Unique mutational changes in SARS-CoV2 genome of different state of India
- Amplicons
- Microbiology
- Infectious disease
- Virus
- Outbreak
- RNA
August 25 2020
)
Unique molecular identifier-based high-resolution HLA typing and transcript quantitation using long-read sequencing
- Amplicons
- Clinical research
- Human genomics
- Long-read
- Gene expression
- Targeted
June 13 2022
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Uncovering the microbiome of invasive sympatric European brown hares and European rabbits in Australia
- Amplicons
- 16S
- Targeted
- DNA
- gDNA
- MinION
November 6 2019
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Ultrarapid and high-resolution HLA class I typing using transposase-based nanopore sequencing applied in pharmacogenetic testing
- Amplicons
- Human genomics
- Clinical research
- Targeted
- MinION
- Phasing
June 23 2023
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TP53 gene mutation analysis in chronic lymphocytic leukemia by nanopore MinION sequencing
- Amplicons
- MinION
- Clinical research
- Cancer research
- Oncology
- Targeted
October 10 2016
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Towards high quality real-time whole genome sequencing during outbreaks using Usutu virus as example
- Amplicons
- Microbiology
- Virus
- Environment
- MinION
- Real-time
April 20 2019
)
Tissue-specific transcription footprinting using RNA PoI DamID (RAPID) in C. elegans
- Amplicons
- Targeted
- DNA
- gDNA
- MinION
- Development
August 24 2020
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Temporal profiles of viral load in posterior oropharyngeal saliva samples and serum antibody responses during infection by SARS-CoV-2: an observational cohort study
- Amplicons
- Microbiology
- Virus
- Whole genome
- Long-read
- Clinical research
March 23 2020