Resource Centre
201 results
ZiBRA project: real-time sequencing of Zika virus in Brazil
- Microbiology
- Real-time
- Targeted
- Biodefence
- Infectious disease
- Portable
- Outbreak
- Scalable
March 30 2016
Yaniv Erlich: A vision for Ubiquitous Sequencing
- Real-time
- WIMP
- MinION
- Monitoring
- Water testing
- Forensics
- Food safety
- Outbreak
- Industrial diagnostics
- Identification
- Portable
- DNA
- Infectious disease
- Microbiology
- Direct analysis
January 1 2014
Xdrop: targeted sequencing of long DNA molecules from low input samples using droplet sorting
- Long-read
- DNA
- MinION
- Real-time
September 6 2018
Whole-Genome Sequencing of a Human Clinical Isolate of emm28 Streptococcus pyogenes Causing Necrotizing Fasciitis Acquired Contemporaneously with Hurricane Harvey
- Bioinformatics
- Microbiology
- Real-time
- MinION
November 13 2017
What’s in my pot? Real-time species identification on the MinION
- Microbiology
- Real-time
- WIMP
- Metagenomics
- Targeted
- Long-read
- Environment
- Portable
May 17 2016
Bringing nanopore sequencing to the operating room
- Clinical research
- Cancer research
- MinION
- Real-time
September 8 2021
Using nanopore sequencing to identify bacterial infection in joint replacements: a preliminary study
- AMR
- Microbiology
- MinION
- Bacteria
- Clinical research
- Real-time
- Bioinformatics
March 30 2024
Ultrarapid targeted nanopore sequencing for fusion detection of leukemias
- Cancer research
- Long-read
- Structural variation
- Clinical research
- Real-time
- MinION
- Targeted
- Human genomics
June 23 2022
Ultra-fast deep-learned CNS tumour classification during surgery
- Cancer research
- Methylation
- Epigenetics
- Clinical research
- Bioinformatics
- Real-time
- MinION
October 11 2023
Tree Lab: Portable genomics for early detection of plant viruses and pests in Sub-Saharan Africa
- Plant
- Environment
- Virus
- Microbiology
- Outbreak
- DNA
- Portable
- Real-time
- MinION
- MinIT
August 21 2019
Towards real-time and affordable strain-level metagenomics-based foodborne outbreak investigations using Oxford Nanopore sequencing technologies
- Real-time
- MinION
- Microbiology
- Metagenomics
- Flongle
- Food safety
- Infectious disease
- Outbreak
September 21 2022
Towards high quality real-time whole genome sequencing during outbreaks using Usutu virus as example
- Microbiology
- Virus
- Environment
- MinION
- Real-time
- Amplicons
- Whole genome
- RNA
- cDNA
- Animal
April 20 2019
Third generation sequencing in the clinical laboratory: Exploring the advantages and challenges of nanopore sequencing
- Microbiology
- Bacteria
- Clinical research
- Long-read
- Portable
- Real-time
- Infectious disease
- Metagenomics
October 16 2019
Targeted nanopore sequencing by real-time mapping of raw electrical signal with UNCALLED
- Targeted
- Real-time
- DNA
- MinION
- Variant calling
- Methylation
- Bioinformatics
November 30 2020
Targeted adaptive long-read sequencing for discovery of complex phased variants in inherited retinal disease patients
- Targeted
- Long-read
- Phasing
- Variant calling
- Structural variation
- SNVs
- Real-time
May 26 2023
Surveillance of Ebola in Guinea using the MinION – the story
- Direct analysis
- Real-time
- MinION
- Microbiology
- Monitoring
- Outbreak
- Portable
- RNA
April 11 2016
Streaming algorithms for identification of pathogens and antibiotic resistance potential from real-time MinION sequencing
- AMR
- Microbiology
- Real-time
- Long-read
- Infectious disease
July 26 2016
Stationary and portable sequencing-based approaches for tracing wastewater contamination in urban stormwater systems
- MinION
- Long-read
- Real-time
- Portable
- Microbiology
August 9 2018
On site DNA barcoding by nanopore sequencing
- Portable
- Scalable
- MinION
- Environment
- Identification
- Real-time
- Library prep
- 16S
October 23 2017