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84 results

Alignment

Bioinformatics tool
yacrd and fpa: upstream tools for long-read genome assembly
March 2 2020
Publication
Weighted minimizer sampling improves long read mapping
February 11 2020
Bioinformatics tool
Vulcan: Improved long-read mapping and structural variant calling via dual-mode alignment
September 24 2021
Bioinformatics tool
Theory of local k-mer selection with applications to long-read alignment
May 23 2021
Publication
Systematic analysis of dark and camouflaged genes reveals disease-relevant genes hiding in plain sight
May 20 2019
Bioinformatics tool
Successful test launch for nanopore sequencing
January 3 2014
Bioinformatics tool
The string decomposition problem and its applications to centromere analysis and assembly
July 13 2020
Publication
A spontaneous complex structural variant in rcan-1 increases exploratory behavior and laboratory fitness of Caenorhabditis elegans
February 24 2020
Bioinformatics tool
Spectral Jaccard Similarity: a new approach to estimating pairwise sequence alignments
October 10 2019
Bioinformatics tool
SPAligner: Alignment of Long Diverged Molecular Sequences to Assembly Graphs
August 23 2019
Publication
A single chromosome assembly of Bacteroides fragilis strain BE1 from Illumina and MinION nanopore sequencing data
April 16 2016
Publication
Sequence features around cleavage sites are highly conserved among different species and a critical determinant for RNA cleavage position across eukaryotes
March 12 2021
Video
Selective single-molecule sequencing and the assembly of human Y chromosomes - Tomas Marques-Bonet
February 6 2020
Publication
The rise and fall of the ancient northern pike master sex determining gene
June 1 2020
Publication
A reference bacterial genome dataset generated on the MinION™ portable single-molecule nanopore sequencer
June 4 2016
Publication
Rapid inference of antibiotic resistance and susceptibility by genomic neighbour typing
February 10 2020
Bioinformatics tool
QAlign: Aligning nanopore reads accurately using current-level modeling
December 3 2019
Publication
Progressive alignment with Cactus: a multiple-genome aligner for the thousand-genome era
August 9 2019
Publication
Precise gene models using long-read sequencing reveal a unique poly(A) signal in Giardia lamblia
April 6 2021
Publication
A plasmid locus associated with Klebsiella clinical infections encodes a microbiome-dependent gut fitness factor
February 27 2020

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Resource Centre

yacrd and fpa: upstream tools for long-read genome assembly

Weighted minimizer sampling improves long read mapping

Vulcan: Improved long-read mapping and structural variant calling via dual-mode alignment

Theory of local k-mer selection with applications to long-read alignment

Systematic analysis of dark and camouflaged genes reveals disease-relevant genes hiding in plain sight

Successful test launch for nanopore sequencing

The string decomposition problem and its applications to centromere analysis and assembly

A spontaneous complex structural variant in rcan-1 increases exploratory behavior and laboratory fitness of Caenorhabditis elegans

Spectral Jaccard Similarity: a new approach to estimating pairwise sequence alignments

SPAligner: Alignment of Long Diverged Molecular Sequences to Assembly Graphs

A single chromosome assembly of Bacteroides fragilis strain BE1 from Illumina and MinION nanopore sequencing data

Sequence features around cleavage sites are highly conserved among different species and a critical determinant for RNA cleavage position across eukaryotes

Selective single-molecule sequencing and the assembly of human Y chromosomes - Tomas Marques-Bonet

The rise and fall of the ancient northern pike master sex determining gene

A reference bacterial genome dataset generated on the MinION™ portable single-molecule nanopore sequencer

Rapid inference of antibiotic resistance and susceptibility by genomic neighbour typing

QAlign: Aligning nanopore reads accurately using current-level modeling

Progressive alignment with Cactus: a multiple-genome aligner for the thousand-genome era

Precise gene models using long-read sequencing reveal a unique poly(A) signal in Giardia lamblia

A plasmid locus associated with Klebsiella clinical infections encodes a microbiome-dependent gut fitness factor

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