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Data Analysis(15 FAQs)
MinKNOW
Post Run Options
(12 FAQs)
Adaptive Sampling
(7 FAQs)
- Which file formats does MinKNOW expect in order to run adaptive sampling?
- What is adaptive sampling (formerly referred to as "read until")?
- What factors affect whether I will see an improvement with adaptive sampling?
- What can I try if I am not getting my entire region of interest enriched when using adaptive sampling?
- If I also want to align to my genome of interest when adaptive sampling is on, do I have to specify alignment as well?
Sequencing
(10 FAQs)
EPI2ME
Running and Managing Workflows
(15 FAQs)
- Which file on a workflows github page provides a list of the tools used, their versions, and parameters to run the command?
- Where can I find the actual code and commands used by the workflows?
- Where can I find example data files to test the workflows on my computer?
- Where can I find a list of the expected output for each workflow?
- The workflow shows in EPI2ME Desktop as completed, but there was no output. What steps should I take next?
Installation and Updating
(8 FAQs)
General EPI2ME FAQS
(2 FAQs)