Resource Centre
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RNA liquid biopsy via nanopore sequencing for novel biomarker discovery and cancer early detection
- RNA
- Cancer research
- PromethION 24/48
July 5 2025
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Long-read DNA and RNA sequencing for inherited polyposis and colorectal cancer: cryptic intronic variants and multiple mutational mechanisms
- RNA
- Cancer research
- Adaptive sampling
- DNA
June 26 2025
Direct RNA nanopore sequencing reveals rapid RNA modification changes following glucose stimulation of human pancreatic beta-cell lines
- RNA
- Methylation
- PromethION 24/48
June 12 2025
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Cell-specific RNA isoform remodelling in the ageing mouse brain
- RNA
- Single cell
- Neuroscience
- PromethION 24/48
June 8 2025
Transcriptome-wide expression and RNA modifications with full-length native RNA and cDNA sequencing
- RNA
- London Calling
- cDNA
- Transcriptomics
May 20 2025
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A compendium of human RNA structures and modifications
- RNA
- RNA
- cDNA
- Epigenetics
- Gene expression
- Bioinformatics
May 19 2025
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Utilising nanopore direct RNA sequencing of blood from patients with sepsis for discovery of co- and post-transcriptional disease biomarkers
- RNA
- Infectious disease
- Transcriptomics
- Clinical research
- MinION Mk1B
May 13 2025
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scnanoseq: an nf-core pipeline for Oxford Nanopore single-cell RNA sequencing
- RNA
- Bioinformatics
- Single cell
- PromethION 24/48
April 11 2025
Flyer: Hereditary Cancer Panel
- RNA
- Adaptive sampling
- Cancer research
- Clinical research
- Direct analysis
- DNA
April 11 2025
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A systematic benchmark of nanopore long-read RNA sequencing for transcript-level analysis in human cell lines
- RNA
- Long-read
- Isoforms
- Splice variation
- Transcriptome
- cDNA
March 13 2025
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The detection, function, and therapeutic potential of RNA 2'-O-methylation
- RNA
- Bioinformatics
- Methylation
- Cancer research
February 24 2025
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Getting started guide: single-cell transcriptomics
- RNA
- Single cell
- cDNA
- Fusion transcript
- Transcriptome
- Transcriptomics
February 24 2025
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Rapid and accurate demultiplexing of direct RNA nanopore sequencing datasets with SeqTagger
- RNA
- Bioinformatics
- MinION
- PromethION
- Scalable
January 29 2025
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Isoform-level discovery, quantification and fusion analysis from single-cell and spatial long-read RNA-seq data with Bambu-Clump
- RNA
- Single cell
- Transcriptomics
- Bioinformatics
- PromethION
January 1 2025
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MrHAMER2: high-accuracy long-read RNA sequencing to decode isoform-specific variation in viral transcripts during latency
- RNA
- Virus
- Splice variation
- Long-read
- Isoforms
- SNVs
December 22 2024
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Exploring how alternative splicing and gene isoforms influence disease
- RNA
- Transcriptome
- Transcriptomics
- Single cell
- Isoforms
December 12 2024
Getting started guide: bulk transcriptomics
- RNA
- cDNA
- Transcriptome
- Transcriptomics
- Fusion transcript
- Cancer research
December 9 2024
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Case study: revealing hidden biology with isoform-level single-cell transcriptomics
- RNA
- Single cell
- Transcriptome
- Transcriptomics
- PromethION
- mRNA
November 6 2024