Resource Centre
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Genomic surveillance of multidrug-resistant organisms based on long-read sequencing
- Bacteria
- Infectious disease
- Structural variation
- AMR
- GridION
- MinKNOW
November 25 2024
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Insights into respiratory microbiome composition and systemic inflammatory biomarkers of bronchiectasis patients
- Bacteria
- Microbiome
- Flongle
- MinION
November 13 2024
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Single laboratory evaluation of the Q20+ nanopore sequencing kit for bacterial outbreak investigations
- Bacteria
- Infectious disease
- GridION
- Whole genome
- Long-read
November 5 2024
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Benchmarking reveals superiority of deep learning variant callers on bacterial nanopore sequence data
- Bacteria
- Microbiology
- Whole genome
- Variant calling
- MinION
- GridION
October 10 2024
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Accurate genotyping of three major respiratory bacterial pathogens with ONT R10.4.1 long-read sequencing
- Bacteria
- Infectious disease
- GridION
- Guppy
October 3 2024
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The rapid detection of a neonatal unit outbreak of a wild-type Klebsiella variicola using decentralised Oxford Nanopore sequencing
- Bacteria
- Infectious disease
- Whole genome
- MinION
- MinKNOW
October 1 2024
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Giant extrachromosomal element “Inocle” potentially expands the adaptive capacity of the human oral microbiome
- Bacteria
- Microbiology
- Plasmid
- PromethION
October 1 2024
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Culture and amplification-free nanopore sequencing for rapid detection of pathogens and antimicrobial resistance genes from urine
- Bacteria
- Microbiology
- AMR
- Clinical research
- MinION
- Flongle
September 16 2024
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Context-Seq: CRISPR-Cas9 targeted nanopore sequencing for transmission dynamics of antimicrobial resistance
- Bacteria
- Microbiology
- AMR
- Targeted
- MinION
- MinKNOW
September 12 2024
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Harnessing non-standard nucleic acids for highly sensitive icosaplex (20-plex) detection of microbial threats
- Bacteria
- Microbiology
- MinION
- MinKNOW
September 10 2024
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Webinar: microbial isolate sequencing solutions
- Bacteria
- Microbiology
- MinION
- Infectious disease
- GridION
September 4 2024
Protocol overview: direct-from-colony microbial sequencing (rapid Salmonella serotyping)
- Bacteria
- Food safety
- Microbiology
- Infectious disease
- Whole genome
- Identification
September 4 2024
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Extraction of high-molecular-weight DNA from Streptococcus spp. for nanopore sequencing in resource-limited settings
- Bacteria
- Microbiology
- Infectious disease
- MinION
- EPI2ME
August 21 2024
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Webinar: microbial profiling and metagenomics | Oxford Nanopore
- Bacteria
- 16S
- Microbiology
- Infectious disease
July 23 2024
Application note: nanopore whole-genome sequencing of foodborne pathogens
- Bacteria
- Infectious disease
- Microbiology
- Food safety
- Identification
- Whole genome
July 10 2024
Detection of hidden antibiotic resistance through real-time genomics
- Bacteria
- Microbiology
- Infectious disease
- Real-time
- MinION
- Clinical research
June 28 2024
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Workflow: 16S sequencing
- Bacteria
- 16S
- Food safety
- Environment
- Identification
- Infectious disease
June 13 2024
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Workflow: bacterial isolate sequencing
- Bacteria
- Whole genome
- DNA
- Microbiology
- Infectious disease
- Clinical research
June 6 2024
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The usefulness of Nanopore Sequencing in Whole-Genome Sequencing-Based Genotyping of Listeria monocytogenes and Salmonella enterica serovar Enteritidi
- Bacteria
- Whole genome
- DNA
- MinION
- Microbiology
May 29 2024