Standalone basecalling software
This command-line software converts raw electrical signals into nucleotide sequences, including identifying base modifications, and provides additional analysis tools including alignment, barcode demultiplexing, and trimming. May be used as an alternative to MinKNOW’s built-in basecaller and post-run analysis.
Dorado
Dorado is a high-performance command-line tool for basecalling and other Nanopore data processing. This is where new research features are released for evaluation before integration with the basecall server and MinKNOW.
Dorado basecall server
High-performance commandline basecaller in a client-server configuration as used in MinKNOW. Documentation is included in the package README.md.
Legacy basecalling software
Legacy software is offered here to support those running ongoing projects. For the majority of customers we recommend our latest software release.
Legacy basecalling software
Nanopore Community
The Nanopore Community contains many useful resources, including:
Protocols
Build or select a protocol using our range of tools.
Bioinformatics
Build or select a protocol using our range of tools.
Extraction methods
Detailed extraction protocols and specific recommendations are provided for various tissue types.