Resource Centre
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Workflow overview: mpox virus sequencing
- EPI2ME
- Amplicons
- Assembly
- DNA
- Extraction
- Infectious disease
November 20 2024
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Workflow overview: whole-plasmid sequencing
- EPI2ME
- Microbiology
- Biopharma
- Infectious disease
- Plasmid
- Bacteria
April 10 2025
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Workflow overview: pathogen metagenomics
- EPI2ME
- Metagenomics
- Microbiology
- Microbiome
- Identification
- Infectious disease
March 18 2025
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Workflow overview: AAV sequencing
- EPI2ME
- Workflow
- Microbiology
- Clinical research
- DNA
- MinION
November 17 2023
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Whole-genome analysis of VREfm isolates with daptomycin resistance using Oxford Nanopore and Illumina sequencing
- EPI2ME
- Bioinformatics
- Whole genome
- Clinical research
- Infectious disease
- Bacteria
June 20 2019
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The wastewater microbiome: A novel insight for COVID-19 surveillance
- EPI2ME
- Bioinformatics
- Microbiology
- Microbiome
- Metagenomics
- Infectious disease
October 9 2020
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Virtual Nanopore Day, Switzerland
- EPI2ME
- Bioinformatics
- Human genomics
- Transcriptome
- Methylation
November 25 2020
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Virtual Nanopore Day, Australia: Bioinformatics
- EPI2ME
- Bioinformatics
- Long-read
- Assembly
- Methylation
- PromethION
November 25 2020
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Validating a molecular cloning experiment using de novo assembly of nanopore reads
- EPI2ME
- London Calling
- Plasmid
May 21 2024
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Ultra-rich human data — variant analysis with EPI2ME
- EPI2ME
- Bioinformatics
- Human genomics
- Population genomics
- Epigenetics
- SNVs
September 17 2024
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Towards ultra-rapid microbial cfDNA nanopore sequencing for the identification of sepsis-causing pathogens
- EPI2ME
- Bioinformatics
- Clinical research
- Infectious disease
- Metagenomics
- Microbiology
May 15 2022
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Towards personalised medicine for breast cancer in the Caribbean: a pilot study
- EPI2ME
- Variant calling
- Cancer research
- Population genomics
- PromethION
- London Calling
May 24 2024
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Talaromyces rugulosus ventriculitis diagnosed by nanopore amplicon sequencing, 2022
- EPI2ME
- Infectious disease
- Clinical research
- WIMP
- Microbiology
- Fungi
June 4 2023
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Showcase: Carrier screening
- EPI2ME
- Cancer research
- Clinical research
- Bioinformatics
- Human genomics
- Population genomics
September 17 2024
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Severus detects somatic structural variation and complex rearrangements in cancer genomes using long-read sequencing
- EPI2ME
- Bioinformatics
- PromethION 24/48
- Cancer research
- Structural variation
April 4 2025
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Secondary analysis update
- EPI2ME
- Bioinformatics
- Assembly
- SNVs
- Phasing
- Structural variation
September 17 2024
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Rhizomicrobiomics of Caesalpinia bonducella, a wonder plant for PCOS treatment
- EPI2ME
- Plant
- Bacteria
- Microbiology
- Microbiome
- Metagenomics
January 17 2021
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Rapid identification of pathogens, antibiotic resistance genes and plasmids in blood cultures by nanopore sequencing
- EPI2ME
- Bioinformatics
- Clinical research
- Microbiology
- Real-time
- Portable
July 17 2020
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Rapid identification, capsular typing and molecular characterization of Streptococcus pneumoniae by using whole genome nanopore sequencing
- EPI2ME
- Bioinformatics
- Microbiology
- Whole genome
- Identification
- MinION
November 13 2020