Resource Centre
21 results
Visualisation and analysis of medically relevant tandem repeats in nanopore sequencing of control cohorts with pathSTR
- Long-read
- Population genomics
- MinION
- PromethION
- Guppy
- MinKNOW
August 15 2024
Ultrarapid and high-resolution HLA class I typing using transposase-based nanopore sequencing applied in pharmacogenetic testing
- Human genomics
- Clinical research
- Targeted
- Amplicons
- MinION
- Phasing
- Long-read
- MinKNOW
June 23 2023
The rapid detection of a neonatal unit outbreak of a wild-type Klebsiella variicola using decentralised Oxford Nanopore sequencing
- Infectious disease
- Bacteria
- Whole genome
- MinION
- MinKNOW
October 1 2024
The interplay of mutagenesis and ecDNA shapes urothelial cancer evolution
- Cancer research
- Structural variation
- PromethION
- MinKNOW
- Q20+
October 9 2024
Sensitivity and specificity of nanopore sequencing for detecting carbapenem and 3rd-generation cephalosporin-resistant Enterobacteriaceae in urine s
- Microbiology
- Targeted
- MinKNOW
- Guppy
- Clinical research
August 30 2024
ROBIN: a unified nanopore-based sequencing assay integrating real-time, intraoperative methylome classification and next-day comprehensive molecular b
- Cancer research
- Methylation
- PromethION
- MinKNOW
- Targeted
- Adaptive sampling
September 11 2024
Parallel molecular data storage by printing epigenetic bits on DNA
- Bioinformatics
- MinION
- MinKNOW
- Guppy
October 23 2024
Nanopore ultra-long sequencing and adaptive sampling spur plant complete telomere-to-telomere genome assembly
- Plant
- Adaptive sampling
- PromethION
- MinKNOW
October 16 2024
Multi-pass, single-molecule nanopore reading of long protein strands
- Protein
- MinION
- MinKNOW
September 11 2024
London Calling 2024 technology update
- Adaptive sampling
- Assembly
- Automation
- Basecalling
- Bioinformatics
- Cancer research
- Chromatin conformation
- Data release
- Data storage
- Development
- Direct analysis
- DNA
- EPI2ME
- Epigenetics
- Flongle
- Flow cell
- Gene expression
- Gene fusions
- GridION
- GridION Q
- High-throughput
- Human genomics
- Identification
- Immunology
- Industrial diagnostics
- Infectious disease
- Isoforms
- Kits
- London Calling
- Long-read
- Methylation
- Microbiology
- Microbiome
- MinION
- MinION Mk1B
- MinION Mk1D
- MinKNOW
- Nanopore Community
- Oncology
- Outbreak
- Phasing
- Plasmid
- Portable
- PromethION
- PromethION 2 Integrated
- Q20+
- Q-Line
- Real-time
- RNA
- Short-read
- SNVs
- Splice variation
- Structural variation
- TurBOT
- 16S
May 24 2024
Identification of drug transporter genomic variants and inhibitors that protect against doxorubicin-induced cardiotoxicity
- Phasing
- Targeted
- Long-read
- Human genomics
- MinION
- MinKNOW
January 25 2022
Harnessing non-standard nucleic acids for highly sensitive icosaplex (20-plex) detection of microbial threats
- Microbiology
- Bacteria
- MinION
- MinKNOW
September 10 2024
Genetic regulation of nascent RNA maturation revealed by direct RNA nanopore sequencing
- Human genomics
- RNA
- mRNA
- Splice variation
- MinION
- P2 Solo
- MinKNOW
August 29 2024
FindingNemo: A toolkit for DNA extraction, library preparation and purification for ultra-long nanopore sequencing
- Long-read
- GridION
- PromethION
- MinKNOW
August 19 2024
Context-Seq: CRISPR-Cas9 targeted nanopore sequencing for transmission dynamics of antimicrobial resistance
- Microbiology
- AMR
- Targeted
- MinION
- MinKNOW
- Guppy
- Bacteria
September 12 2024
Characterisation of novel CYP2D6 alleles across sub-Saharan African populations
- Metabolic
- Structural variation
- Human genomics
- MinION
- MinKNOW
- Variant calling
September 24 2022
Characterisation of complex structural variation in the CYP2D6-CYP2D7-CYP2D8 gene loci using single-molecule long-read sequencing
- Phasing
- Human genomics
- Targeted
- Long-read
- MinION
- MinKNOW
June 23 2023
Cas9 targeted nanopore sequencing with enhanced variant calling improves CYP2D6-CYP2D7 hybrid allele genotyping
- Human genomics
- Clinical research
- Targeted
- Long-read
- Variant calling
- Structural variation
- DNA
- Phasing
- Adaptive sampling
- MinION
- MinKNOW
September 23 2022
Assessing the readiness of Oxford Nanopore sequencing for clinical genomics applications
- Human genomics
- Variant calling
- PromethION
- MinKNOW
- SNVs
November 4 2024