Resource Centre
37 results
yacrd and fpa: upstream tools for long-read genome assembly
- Long-read
- Assembly
- Basecalling
- Alignment
- Bioinformatics
March 2 2020
Untangling heterogeneity in DNA replication with nanopore sequencing
- London Calling
- Epigenetics
- Raw data
- Basecalling
- Whole genome
- Single cell
May 29 2019
A reference bacterial genome dataset generated on the MinION™ portable single-molecule nanopore sequencer
- MinION
- Microbiology
- Basecalling
- Alignment
- gDNA
- DNA
- Whole genome
- Portable
June 4 2016
Predictive power of long-read whole-genome sequencing for rapid diagnostics of multidrug-resistant Brachyspira hyodysenteriae strains
- Microbiology
- Infectious disease
- Agriculture: animal
- Long-read
- Assembly
- gDNA
- DNA
- Basecalling
January 5 2023
poRe: an R package for the visualization and analysis of nanopore sequencing data
- Bioinformatics
- MinION
- Raw data
- Basecalling
January 12 2015
Picopore: A tool for reducing the size of Oxford Nanopore Technologies' datasets without losing information.
- MinION
- Bioinformatics
- Basecalling
- Raw data
February 14 2017
Performance of neural network basecalling tools for Oxford Nanopore sequencing
- Raw data
- Basecalling
- Assembly
June 24 2019
NCM 2024 technology update
- Nanopore Community Meeting
- Bioinformatics
- Methylation
- Transcriptomics
- Whole genome
- Variant calling
- Basecalling
- EPI2ME
- MinION Mk1D
- Workflow
September 16 2024
Native molecule sequencing by nano-ID reveals synthesis and stability of RNA isoforms
- RNA
- Direct analysis
- MinION
- Long-read
- Basecalling
- Raw data
April 7 2019
NanoReviser: an error-correction tool for Nanopore sequencing based on a deep learning algorithm
- Bioinformatics
- Raw data
- Basecalling
- Long-read
- Epigenetics
- Methylation
August 12 2020
Nanopore sequencing: review of potential applications in functional genomics
- Long-read
- Portable
- DNA
- RNA
- MinION
- PromethION
- VolTRAX
- Direct analysis
- Epigenetics
- Basecalling
- Assembly
- Transcriptome
- Gene expression
April 29 2019
NanoMod: a computational tool to detect DNA modifications using Nanopore long-read sequencing data
- Epigenetics
- Methylation
- Basecalling
- Direct analysis
- Raw data
- Bioinformatics
February 4 2019
NanoDJ: a Dockerized Jupyter notebook for interactive Oxford Nanopore MinION sequence manipulation and genome assembly
- Assembly
- Raw data
- Basecalling
- Bioinformatics
May 9 2019
minoTour - A real time LIMS platform for Oxford Nanopore data
- MinION
- GridION
- Basecalling
- Real-time
- Metagenomics
June 19 2020
MinION Analysis and Reference Consortium: Phase 1 data release and analysis
- Long-read
- Real-time
- MinION
- Basecalling
- gDNA
- Whole genome
- Microbiology
- Alignment
February 7 2015
Machine Boss: rapid prototyping of bioinformatic automata
- Bioinformatics
- Basecalling
- Alignment
- Microbiology
February 14 2020
London Calling 2024 technology update
- Adaptive sampling
- Assembly
- Automation
- Basecalling
- Bioinformatics
- Cancer research
- Chromatin conformation
- Data release
- Data storage
- Development
- Direct analysis
- DNA
- EPI2ME
- Epigenetics
- Flongle
- Flow cell
- Gene expression
- Gene fusions
- GridION
- GridION Q
- High-throughput
- Human genomics
- Identification
- Immunology
- Industrial diagnostics
- Infectious disease
- Isoforms
- Kits
- London Calling
- Long-read
- Methylation
- Microbiology
- Microbiome
- MinION
- MinION Mk1B
- MinION Mk1D
- MinKNOW
- Nanopore Community
- Oncology
- Outbreak
- Phasing
- Plasmid
- Portable
- PromethION
- PromethION 2 Integrated
- Q20+
- Q-Line
- Real-time
- RNA
- Short-read
- SNVs
- Splice variation
- Structural variation
- TurBOT
- 16S
May 24 2024
Impact of lossy compression of nanopore raw signal data on basecall and consensus accuracy
- Raw data
- Basecalling
April 20 2020
High quality genome assemblies of Mycoplasma bovis using a taxon-specific Bonito basecaller for MinION and Flongle long-read nanopore sequencing
- Microbiology
- Whole genome
- Assembly
- Long-read
- MinION
- gDNA
- DNA
- Flongle
- Basecalling
- Bioinformatics
November 11 2020