Resource Centre
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Workflow overview: single-cell transcriptomics
- Gene fusions
- Single cell
- Transcriptome
- PromethION
- Cancer research
- Clinical research
February 20 2024
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Third-generation Sequencing Reveals Extensive Polycistronism and Transcriptional Overlapping in a Baculovirus
- Gene fusions
- Microbiology
- Infectious disease
- RNA
- cDNA
- Transcriptome
June 5 2018
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Single-cell multi-omics reveals elevated plasticity and stem-cell-like blasts relevant to the poor prognosis of KMT2A-rearranged leukemia
- Gene fusions
- Clinical research
- Cancer research
- Oncology
- Single cell
- RNA
December 7 2020
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Simultaneously detecting methylation and genetic variations of BCR-ABL1 fusion gene by nanopore Cas9-targeted sequencing
- Gene fusions
- Cancer research
- Targeted
- Methylation
- Epigenetics
- Structural variation
June 22 2023
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Case study: powered by long nanopore reads, liver transcriptome analysis reveals new clues about cancer
- Gene fusions
- Cancer research
- Transcriptome
- Isoforms
- Splice variation
- cDNA
February 21 2024
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Partner independent fusion gene detection by multiplexed CRISPR-Cas9 enrichment and long read nanopore sequencing
- Gene fusions
- Targeted
- Structural variation
- Human genomics
- Clinical research
- Cancer research
June 5 2020
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NCM 2021: Resolution of complex human papillomavirus and human sequences
- Gene fusions
- Cancer research
- Clinical research
- Gene expression
- Human genomics
- Infectious disease
December 2 2021
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NCM 2021: Phasing analysis of lung cancer genomes using PromethION R10.4
- Gene fusions
- Cancer research
- Epigenetics
- Gene expression
- Whole genome
- PromethION
December 2 2021
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NCM 2021: Classification of pediatric acute leukaemia using full-length transcriptomics
- Gene fusions
- Bioinformatics
- Cancer research
- Clinical research
- Gene expression
- Human genomics
December 2 2021
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Nanopore sequencing improves the characterisation of mutations driving blood cancer
- Gene fusions
- Cancer research
- Targeted
- mRNA
- Splice variation
- cDNA
June 16 2023
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A nanopore sequencing–based assay for rapid detection of gene fusions
- Gene fusions
- Clinical research
- Human genomics
- Targeted
- Cancer research
- Real-time
September 28 2018
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Nanopore RNA-Seq to HLA genotype and correlate donor HLA expression with flow cytometric crossmatch results - Eric Weimer
- Gene fusions
- Microbiology
- RNA
- AMR
- Gene expression
- Targeted
February 6 2020
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Long read sequencing reveals a novel class of structural aberrations in cancers: identification and characterization of cancerous local amplifications
- Gene fusions
- Clinical research
- Cancer research
- Oncology
- Human genomics
- Long-read
April 29 2019
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London Calling 2024 technology update
- Gene fusions
- Adaptive sampling
- Assembly
- Automation
- Basecalling
- Bioinformatics
May 24 2024
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Nanopore sequencing of cervical cancers uncovers novel genomic, epigenomic, and transcriptomic features associated with HPV integration events
- Gene fusions
- Infectious disease
- Human genomics
- Cancer research
- Transcriptome
- Structural variation
May 24 2021
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A targeted nanopore sequencing-based test method for the rapid diagnosis of drug-resistant TB - Justin O'Grady
- Gene fusions
- RNA
- cDNA
- Gene expression
- Structural variation
- Whole genome
February 28 2020
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Improving nanopore read accuracy with the R2C2 method enables the sequencing of highly multiplexed full-length single-cell cDNA
- Gene fusions
- RNA
- cDNA
- Transcriptome
September 25 2018
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High-throughput targeted long-read single cell sequencing reveals the clonal and transcriptional landscape of lymphocytes
- Gene fusions
- RNA
- cDNA
- Transcriptome
- Cancer research
- Oncology
July 16 2019
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Getting started guide: single-cell transcriptomics
- Gene fusions
- Single cell
- RNA
- cDNA
- Fusion transcript
- Transcriptome
November 1 2024
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Genomic BCR-ABL1 breakpoint characterization by a multi-strategy approach for personalized monitoring of residual disease in chronic myeloid leukemia patients
- Gene fusions
- Cancer research
- Oncology
- Human genomics
- Clinical research
- Long-read
January 5 2018