Resource Centre
313 results
Zoonotic spill-over of SARS-CoV-2: mink-adapted virus in humans
- Infectious disease
- Microbiology
- RNA
- cDNA
- Amplicons
March 10 2022
Zika virus amplification using strand displacement isothermal method and sequencing using nanopore technology
- Microbiology
- Virus
- Amplicons
- Whole genome
- Targeted
- MinION
- RNA
- cDNA
May 5 2020
Whole-genome sequencing of SARS-CoV-2 in the Republic of Ireland during waves 1 and 2 of the pandemic
- MinION
- GridION
- Microbiology
- Outbreak
- cDNA
- RNA
- Amplicons
- Infectious disease
- Variant calling
- SNVs
February 10 2021
The wastewater microbiome: A novel insight for COVID-19 surveillance
- Bioinformatics
- Microbiology
- Microbiome
- Metagenomics
- Infectious disease
- Virus
- Bacteria
- Outbreak
- 16S
- Targeted
- Environment
- Amplicons
- Identification
- DNA
- MinION
- EPI2ME
- Water testing
October 9 2020
Virus-derived variation in diverse human genomes
- Microbiology
- Virus
- Targeted
- Structural variation
- Human genomics
- Flongle
- DNA
- Amplicons
- Evolution
November 20 2020
Viral sequencing reveals US healthcare personnel rarely become infected with SARS-CoV-2 through patient contact
- GridION
- Microbiology
- Outbreak
- cDNA
- RNA
- Amplicons
- Infectious disease
- Variant calling
- SNVs
February 1 2021
Viral genetic sequencing identifies staff transmission of COVID-19 is important in a community hospital outbreak
- MinION
- Microbiology
- Outbreak
- cDNA
- RNA
- Amplicons
- Infectious disease
- Variant calling
- SNVs
February 19 2021
Verification of CRISPR editing by Xdrop™ Indirect Sequence Capture followed by short- and long- read sequencing
- Targeted
- MinION
- Long-read
- DNA
- Amplicons
May 30 2020
Validation and application of multiplex nanopore MinION sequencing for molecular typing of human adenoviruses in clinical samples: a cost effective sequencing strategy
- Virus
- Microbiology
- MinION
- Clinical research
- Infectious disease
- Amplicons
April 29 2019
Utilizing nanopore sequencing technology for the rapid and comprehensive characterization of eleven HLA loci; addressing the need for deceased donor expedited HLA typing
- Human genomics
- SNVs
- Phasing
- DNA
- Amplicons
- Targeted
- MinION
- Clinical research
- Variant calling
- Flongle
June 25 2020
Use of Oxford Nanopore MinION to generate full-length sequences of the Blastocystis small subunit (SSU) rRNA gene
- Protist
- Microbiology
- 16S
- Targeted
- MinION
- Long-read
- DNA
- Infectious disease
- Amplicons
November 25 2020
Unique mutational changes in SARS-CoV2 genome of different state of India
- Microbiology
- Infectious disease
- Virus
- Outbreak
- RNA
- cDNA
- PromethION
- Whole genome
- Amplicons
- Assembly
- Variant calling
- SNVs
August 25 2020
Unique molecular identifier-based high-resolution HLA typing and transcript quantitation using long-read sequencing
- Clinical research
- Human genomics
- Long-read
- Gene expression
- Amplicons
- Targeted
- RNA
- cDNA
- MinION
June 13 2022
Uncovering the microbiome of invasive sympatric European brown hares and European rabbits in Australia
- 16S
- Targeted
- Amplicons
- DNA
- gDNA
- MinION
- Microbiology
- Microbiome
- Metagenomics
- Bacteria
- Environment
- Animal
November 6 2019
Ultrarapid and high-resolution HLA class I typing using transposase-based nanopore sequencing applied in pharmacogenetic testing
- Human genomics
- Clinical research
- Targeted
- Amplicons
- MinION
June 23 2023
TP53 gene mutation analysis in chronic lymphocytic leukemia by nanopore MinION sequencing
- MinION
- Clinical research
- Cancer research
- Oncology
- Targeted
- Amplicons
- DNA
- Variant calling
October 10 2016
Towards high quality real-time whole genome sequencing during outbreaks using Usutu virus as example
- Microbiology
- Virus
- Environment
- MinION
- Real-time
- Amplicons
- Whole genome
- RNA
- cDNA
- Animal
April 20 2019
Tissue-specific transcription footprinting using RNA PoI DamID (RAPID) in C. elegans
- Targeted
- DNA
- gDNA
- Amplicons
- MinION
- Development
August 24 2020
Temporal profiles of viral load in posterior oropharyngeal saliva samples and serum antibody responses during infection by SARS-CoV-2: an observational cohort study
- Microbiology
- Virus
- Whole genome
- Long-read
- Clinical research
- Outbreak
- MinION
- Assembly
- Amplicons
- RNA
- cDNA
- Infectious disease
March 23 2020
Targeted sequencing workflows for comprehensive drug resistance profiling of Mycobacterium tuberculosis cultures using Illumina MiSeq and Nanopore MinION: comparison of analytical and diagnostic performance, turnaround time and cost
- Microbiology
- Bacteria
- AMR
- DNA
- gDNA
- Amplicons
- Targeted
- MinION
- Portable
- Infectious disease
- Clinical research
September 8 2019