NanoPack: visualizing and processing long read sequencing data

Get startedSubscribe
Return to Resources

Summary
Here we describe NanoPack, a set of tools developed for visualization and processing of long-read sequencing data from Oxford Nanopore Technologies and Pacific Biosciences.

Availability and implementation
The NanoPack tools are written in Python3 and released under the GNU GPL3.0 License. The source code can be found at https://github.com/wdecoster/nanopack, together with links to separate scripts and their documentation. The scripts are compatible with Linux, Mac OS and the MS Windows 10 subsystem for Linux and are available as a graphical user interface, a web service at http://nanoplot.bioinf.be and command line tools.

Authors: Wouter De Coster, Svenn D'Hert, Darrin Schultz, Marc Cruts, Christine Van Broeckhoven
Read the full text
  • Published on: March 14 2018
  • Source: Bioinformatics