Resource Centre
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ZiBRA project: real-time sequencing of Zika virus in Brazil
- Real-time
- Microbiology
- Targeted
- Biodefence
- Infectious disease
- Portable
March 30 2016
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Yaniv Erlich: A vision for Ubiquitous Sequencing
- Real-time
- WIMP
- MinION
- Monitoring
- Water testing
- Forensics
January 1 2014
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Xdrop: targeted sequencing of long DNA molecules from low input samples using droplet sorting
- Real-time
- Long-read
- DNA
- MinION
September 6 2018
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Whole-Genome Sequencing of a Human Clinical Isolate of emm28 Streptococcus pyogenes Causing Necrotizing Fasciitis Acquired Contemporaneously with Hurricane Harvey
- Real-time
- Bioinformatics
- Microbiology
- MinION
November 13 2017
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What’s in my pot? Real-time species identification on the MinION
- Real-time
- Microbiology
- WIMP
- Metagenomics
- Targeted
- Long-read
May 17 2016
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Bringing nanopore sequencing to the operating room
- Real-time
- Clinical research
- Cancer research
- MinION
September 8 2021
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Using nanopore sequencing to identify bacterial infection in joint replacements: a preliminary study
- Real-time
- AMR
- Microbiology
- MinION
- Bacteria
- Clinical research
March 30 2024
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Ultrarapid targeted nanopore sequencing for fusion detection of leukemias
- Real-time
- Cancer research
- Long-read
- Structural variation
- Clinical research
- MinION
June 23 2022
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Publication: Ultra-fast deep-learned CNS tumour classification during surgery
- Real-time
- Cancer research
- Methylation
- Epigenetics
- Clinical research
- Bioinformatics
October 11 2023
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Tree Lab: Portable genomics for early detection of plant viruses and pests in Sub-Saharan Africa
- Real-time
- Plant
- Environment
- Virus
- Microbiology
- Outbreak
August 21 2019
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Towards real-time and affordable strain-level metagenomics-based foodborne outbreak investigations using Oxford Nanopore sequencing technologies
- Real-time
- MinION
- Microbiology
- Metagenomics
- Flongle
- Food safety
September 21 2022
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Towards high quality real-time whole genome sequencing during outbreaks using Usutu virus as example
- Real-time
- Microbiology
- Virus
- Environment
- MinION
- Amplicons
April 20 2019
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Third generation sequencing in the clinical laboratory: Exploring the advantages and challenges of nanopore sequencing
- Real-time
- Microbiology
- Bacteria
- Clinical research
- Long-read
- Portable
October 16 2019
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The performance of nanopore sequencing in rapid detection of pathogens and antimicrobial resistance genes in blood cultures
- Real-time
- AMR
- Infectious disease
- GridION
February 2 2025
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Targeted nanopore sequencing by real-time mapping of raw electrical signal with UNCALLED
- Real-time
- Targeted
- DNA
- MinION
- Variant calling
- Methylation
November 30 2020
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Targeted adaptive long-read sequencing for discovery of complex phased variants in inherited retinal disease patients
- Real-time
- Targeted
- Long-read
- Phasing
- Variant calling
- Structural variation
May 26 2023
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Surveillance of Ebola in Guinea using the MinION – the story
- Real-time
- Direct analysis
- MinION
- Microbiology
- Monitoring
- Outbreak
April 11 2016
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Streaming algorithms for identification of pathogens and antibiotic resistance potential from real-time MinION sequencing
- Real-time
- AMR
- Microbiology
- Long-read
- Infectious disease
July 26 2016
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Stationary and portable sequencing-based approaches for tracing wastewater contamination in urban stormwater systems
- Real-time
- MinION
- Long-read
- Portable
- Microbiology
August 9 2018