Resource Centre
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Accurate and reproducible whole-genome genotyping for bacterial genomic surveillance with nanopore sequencing data
- MinKNOW
- Bacteria
- Infectious disease
- AMR
- MinION
- GridION
June 13 2025
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Identification of GGC repeat expansions in ZFHX3 among Chilean movement disorder patients
- MinKNOW
- Human genomics
- Methylation
- SNVs
- Structural variation
- PromethION 24/48
June 3 2025
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Evaluating the diagnostic utility of 16S ONT sequencing in patients with central nervous system infections and its usefulness in antimicrobial
- MinKNOW
- Infectious disease
- MinION
- EPI2ME
- 16S
- Bacteria
May 26 2025
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ROBIN: A unified nanopore-based assay integrating intraoperative methylome classification and next-day comprehensive profiling for ultra-rapid tumour
- MinKNOW
- Cancer research
- Methylation
- PromethION 24/48
- Targeted
- Adaptive sampling
May 20 2025
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Nanopore-based hybridisation capture approaches for targeted viral metagenomics and whole-genome sequencing
- MinKNOW
- Infectious disease
- Metagenomics
- Virus
- Targeted
- GridION
April 9 2025
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A high-throughput and time-efficient nanopore full-length 16S rRNA gene sequencing protocol for synthetic microbial communities
- MinKNOW
- Microbiology
- 16S
- MinION
April 7 2025
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A portable, nanopore-based genotyping platform for near real-time detection of Puccinia graminis f. sp. tritici lineages and fungicide sensitivity
- MinKNOW
- Plant
- Fungi
- Amplicons
- Targeted
- MinION
April 1 2025
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A dual-mode targeted nanopore sequencing assay for comprehensive SMN1 and SMN2 variant analysis
- MinKNOW
- Human genomics
- Clinical research
- Structural variation
- Targeted
- Amplicons
March 28 2025
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Nanopore long-read sequencing as a first-tier diagnostic test to detect repeat expansions in neurological disorders
- MinKNOW
- Human genomics
- Neuroscience
- Methylation
- Adaptive sampling
- Structural variation
March 21 2025
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Characterisation of Vibrio cholerae from the Jukskei River in Johannesburg, South Africa
- MinKNOW
- Infectious disease
- Bacteria
- EPI2ME
- Water testing
March 12 2025
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Oxford Nanopore long-read sequencing with CRISPR/Cas9-mediated target selection for accurate characterisation of copy number variants in the LDLR gene
- MinKNOW
- Human genomics
- Cas enrichment
- MinION
- Structural variation
March 4 2025
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Human milk microbiota across lactation stages and free glutamate concentrations in healthy Ecuadorian women
- MinKNOW
- Microbiology
- Microbiome
- 16S
- Amplicons
- GridION
February 26 2025
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Comparison of nanopore with Illumina whole genome assemblies of the Epstein-Barr virus in Burkitt lymphoma
- MinKNOW
- Cancer research
- Virus
- PromethION 24/48
- Portable
February 25 2025
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Genomic insights into plasmid mediated AMR genes, virulence factors and mobile genetic elements in raw milk Escherichia coli from Gujarat, India
- MinKNOW
- Infectious disease
- AMR
- Animal
- Food safety
- MinION
February 21 2025
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Diagnostic utility of single-locus DNA methylation mark in Sotos syndrome developed by nanopore sequencing-based episignature
- MinKNOW
- Human genomics
- Methylation
- Adaptive sampling
- GridION
- PromethION 24/48
February 18 2025
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Workflow overview: plant genome assembly
- MinKNOW
- Assembly
- DNA
- Epigenetics
- Kits
- Library prep
February 17 2025
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Contaminating manufacturing plasmids and disrupted vector genomes present in liver tissue following adeno-associated virus gene therapy
- MinKNOW
- Biopharma
- Human genomics
- AAV
- PromethION
January 14 2025
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Cost-effective and flexible preimplantation genetic testing (PGT) using adaptive sampling-based targeted nanopore sequencing (ASTN-seq)
- MinKNOW
- Human genomics
- Adaptive sampling
- Targeted
- MinION
January 10 2025
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Saliva microbiome profiling by full-gene 16S rRNA Oxford Nanopore Technology versus Illumina MiSeq sequencing
- MinKNOW
- 16S
- Microbiome
- GridION
- Bacteria
December 18 2024
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Comprehensive pathogen identification and antimicrobial resistance prediction from positive blood cultures using nanopore sequencing technology
- MinKNOW
- Infectious disease
- AMR
- Adaptive sampling
- GridION
December 2 2024