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Telomere-to-telomere phased genome assembly using error-corrected Simplex nanopore reads

  • Published on: May 21 2024
  • Source: bioRxiv
Three horizontal parallel strands of DNA with the bases in blue, yellow and green with the letters floating above. Each strand has the same order of bases

For telomere-to-telomere studies, many researchers use at least two long-read sequencing technologies. This approach results in increased costs and a requirement for a higher starting amount of DNA. Here the authors have developed the HERRO model which error corrects nanopore simplex ultra-long reads, increasing accuracy up to 100-fold. This data can then be used to achieve highly contiguous assemblies comparable to a combined sequencing approach.

Authors: Dominik Stanojevic, Dehui Lin, Paola Florez De Sessions, Mile Sikic

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