Resource Centre
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Workflow overview: single-cell transcriptomics
- Splice variation
- Single cell
- Transcriptome
- PromethION
- Cancer research
- Clinical research
February 20 2024
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Workflow overview: direct RNA sequencing
- Splice variation
- Workflow
- RNA
- cDNA
- Methylation
- Epigenetics
February 26 2024
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Widespread occurrence of hybrid internal-terminal exons in human transcriptomes
- Splice variation
- Transcriptome
- Long-read
- RNA
- cDNA
- Isoforms
May 29 2021
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Using deep long-read RNAseq in Alzheimer’s disease brain to assess clinical relevance of RNA isoform diversity
- Splice variation
- PromethION
- Transcriptome
- Neuroscience
- Transcriptomics
- Isoforms
August 7 2023
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Transcriptomic reprogramming, alternative splicing and RNA methylation in potato (Solanum tuberosum L.) plants in response to potato virus Y infection
- Splice variation
- Plant
- Long-read
- Methylation
- Epigenetics
- Transcriptome
February 25 2022
Transcriptome variation in human tissues revealed by long-read sequencing
- Splice variation
- Transcriptome
- RNA
- cDNA
- Human genomics
- MinION
August 3 2022
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Transcriptional neighborhoods regulate transcript isoform lengths and expression levels
- Splice variation
- MinION
- RNA
- Gene expression
- Long-read
- Transcriptome
March 3 2022
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TEQUILA-seq: a versatile and low-cost method for targeted long-read RNA sequencing
- Splice variation
- MinION
- GridION
- Transcriptome
- Oncology
- Sequence capture
August 8 2023
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Targeted long-read sequencing as a single assay improves diagnosis of spastic-ataxia disorders
- Splice variation
- Targeted
- Human genomics
- Clinical research
- Long-read
- Variant calling
September 6 2024
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A systematic benchmark of Nanopore long read RNA sequencing for transcript level analysis in human cell lines
- Splice variation
- Long-read
- Isoforms
- Transcriptome
- cDNA
- RNA
April 22 2021
A systematic benchmark of Nanopore long read RNA sequencing for transcript analysis in human cell lines
- Splice variation
- Isoforms
- Transcriptome
- Human genomics
- Long-read
- PromethION
April 22 2021
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Study of SPG11’s splicing, in neuronal and non-neuronal cells, by long-read sequencing: implication on phenotype
- Splice variation
- London Calling
- Bioinformatics
- Gene expression
- Human genomics
- Whole genome
May 19 2023
Single-nuclei isoform RNA sequencing unlocks barcoded exon connectivity in frozen brain tissue
- Splice variation
- Long-read
- Isoforms
- PromethION
- RNA
- cDNA
March 7 2022
Single-nuclei isoform RNA sequencing reveals combination patterns of transcript elements across human brain cell types
- Splice variation
- Transcriptome
- Human genomics
- Isoforms
- PromethION
- RNA
December 30 2021
Single-molecule, full-length transcript isoform sequencing reveals disease mutation-associated RNA isoforms in cardiomyocytes
- Splice variation
- cDNA
- MinION
- Transcriptome
- Isoforms
- Long-read
June 18 2021
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Single-cell multiomics reveal the scale of multi-layered adaptations enabling CLL relapse during venetoclax therapy
- Splice variation
- Single cell
- Transcriptome
- Cancer research
- Human genomics
- RNA
June 16 2022
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Selective ablation of 3’ RNA ends and processive RTs facilitate direct cDNA sequencing of full-length host cell and viral transcripts
- Splice variation
- Long-read
- RNA
- cDNA
- Microbiology
- Clinical research
February 2 2022
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RUNX1 isoform disequilibrium in the development of trisomy 21 associated myeloid leukemia
- Splice variation
- RNA
- cDNA
- Human genomics
- Transcriptome
- Isoforms
March 8 2022
Pre-mRNA splicing order is predetermined and maintains splicing fidelity across multi-intronic transcripts
- Splice variation
- RNA
- cDNA
August 17 2022
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Case study: powered by long nanopore reads, liver transcriptome analysis reveals new clues about cancer
- Splice variation
- Cancer research
- Transcriptome
- Isoforms
- cDNA
- RNA
February 21 2024