Resource Centre
Publication )
Yaniv Erlich: A vision for Ubiquitous Sequencing
Workflow )
Workflow overview: 16S sequencing
Video )
Whole Genome Sequencing (WGS) and the food industry
Publication )
Whole-genome sequencing and comparative genomics analysis of the wild edible mushroom (Gomphus purpuraceus) provide insights into its potential food application and artificial domestication
Events )
Virtual Nanopore Day, Singapore
Publication )
Towards real-time and affordable strain-level metagenomics-based foodborne outbreak investigations using Oxford Nanopore sequencing technologies
Publication )
Subtyping evaluation of Salmonella enteritidis using single nucleotide polymorphism and core genome multilocus sequence typing with nanopore reads
Case study )
Case study: species-level profiling of environmental microbiota with high-accuracy full-length nanopore 16S sequencing
Publication )
The Salmonella enterica plasmidome as a reservoir of antibiotic resistance
Publication )
Salmonella enterica and Escherichia coli in wheat flour: detection and serotyping by a quasimetagenomic approach assisted by magnetic capture, multiple-displacement amplification, and real-time sequencing
Publication )
Safety assessment of a nham starter culture Lactobacillus plantarum BCC9546 via whole-genome analysis
Case study )
Rapid whole genome and plasmid sequencing of foodborne pathogens
Publication )
Rapid Oxford Nanopore Technologies MinION sequencing workflow for Campylobacter jejuni identification in broilers on site
Publication Rapid, multiplexed, whole genome and plasmid sequencing of foodborne pathogens using long-read nanopore technology
Publication )
Rapid and sensitive virulence prediction and identification of Newcastle disease virus genotypes using third-generation sequencing
Publication )
Quasi-metagenomics and realtime sequencing aided detection and subtyping of Salmonella enterica from food samples
Publication )
Precision long-read metagenomics sequencing for food safety by detection and assembly of Shiga toxin-producing Escherichia coli in irrigation water
Publication )
The power, potential, benefits, and challenges of implementing high-throughput sequencing in food safety systems
Workflow )
Protocol overview: direct-from-colony microbial sequencing (rapid Salmonella serotyping)
Publication )
Novel IncFII plasmid harbouring blaNDM-4 in a carbapenem-resistant Escherichia coli of pig origin, Italy
