Resource Centre
59 results
ZiBRA project: real-time sequencing of Zika virus in Brazil
- Microbiology
- Real-time
- Targeted
- Biodefence
- Infectious disease
- Portable
- Outbreak
- Scalable
March 30 2016
Using MinION to characterize dog skin microbiota through full-length 16S rRNA gene sequencing approach
- MinION
- 16S
- Microbiome
- Microbiology
- Infectious disease
- Portable
- Scalable
July 21 2017
On site DNA barcoding by nanopore sequencing
- Portable
- Scalable
- MinION
- Environment
- Identification
- Real-time
- Library prep
- 16S
October 23 2017
Serotyping dengue virus with isothermal amplification and a portable sequencer
- Microbiology
- Biodefence
- RNA
- cDNA
- MinION
- Long-read
- Portable
- Outbreak
- Scalable
June 14 2017
Sequencing the gigabase plant genome of the wild tomato species Solanum pennellii using Oxford Nanopore single molecule sequencing
- MinION
- Whole genome
- Plant
- Long-read
- Portable
- Scalable
- Agriculture: animal
- Assembly
December 13 2016
Selective single molecule sequencing and assembly of a human Y chromosome of African origin
- Human genomics
- Assembly
- Long-read
- Portable
- Epigenetics
- Scalable
January 2 2019
Selection of Potential Therapeutic Bacteriophages that Lyse a CTX-M-15 Extended Spectrum β-Lactamase Producing Salmonella enterica Serovar Typhi Strain from the Democratic Republic of the Congo
- Microbiology
- Infectious disease
- Long-read
- MinION
- Portable
- Scalable
April 3 2018
Scywalker: scalable end-to-end data analysis workflow for long-read single-cell transcriptome sequencing
- Single cell
- Transcriptome
- Transcriptomics
- Workflow
- Scalable
- Long-read
- cDNA
- PromethION
- Guppy
September 10 2024
Resolving plasmid structures in Enterobacteriaceae using the MinION nanopore sequencer: assessment of MinION and MinION/Illumina hybrid data assembly approaches
- MinION
- Microbiology
- Infectious disease
- Long-read
- Portable
- DNA
- Scalable
June 9 2017
Real time portable genome sequencing for global food security
- Microbiology
- Infectious disease
- Plant
- Long-read
- Portable
- Scalable
- Agriculture: animal
July 18 2018
Real-time, portable genome sequencing for Ebola surveillance.
- Microbiology
- Real-time
- Infectious disease
- Biodefence
- Portable
- Outbreak
- Scalable
February 20 2016
Real-time DNA barcoding in a remote rainforest using nanopore sequencing
- Environment
- DNA
- MinION
- Long-read
- Exome
- Portable
- Sequence capture
- Amplicons
- Scalable
September 15 2017
Real-time analysis of nanopore-based metagenomic sequencing from infected orthopaedic devices
- Metagenomics
- Clinical research
- Infectious disease
- Microbiology
- Long-read
- Portable
- MinION
- Scalable
September 27 2018
Rapid short-read sequencing and aneuploidy detection using MinION nanopore technology
- Clinical research
- Real-time
- WIMP
- Reproductive medicine
- Targeted
- Portable
- DNA
- Scalable
February 16 2016
Rapid preimplantation genetic screening (PGS) using a handheld, nanopore-based, DNA sequencer
- MinION
- Human genomics
- Clinical research
- Long-read
- Portable
- Scalable
March 1 2018
Rapid low-cost assembly of the Drosophila melanogaster reference genome using low-coverage, long-read sequencing
- Assembly
- Long-read
- MinION
- Portable
- Structural variation
- Scalable
July 17 2018
Rapid genome sequencing for outbreak analysis of the emerging human fungal pathogen Candida auris
- Infectious disease
- Microbiology
- Biodefence
- Portable
- Long-read
- MinION
- Clinical research
- Outbreak
- Scalable
October 13 2017
Rapid and Accurate Sequencing of Enterovirus Genomes Using MinION Nanopore Sequencer.
- Clinical research
- MinION
- Infectious disease
- Microbiology
- Long-read
- Portable
- Scalable
October 30 2017
Quasi-metagenomics and realtime sequencing aided detection and subtyping of Salmonella enterica from food samples
- Microbiology
- Food safety
- Portable
- MinION
- Industrial diagnostics
- Scalable
January 1 2018
A portable system for rapid bacterial composition analysis using a nanopore-based sequencer and laptop computer
- MinION
- Long-read
- Targeted
- Microbiology
- Infectious disease
- Portable
- Exome
- Sequence capture
- Amplicons
- Scalable
July 18 2017