Resource Centre
1075 results
Yersinia canariae sp. nov., isolated from a human yersiniosis case
- Assembly
- MinION
- Microbiology
- Infectious disease
- 16S
- Long-read
- gDNA
- DNA
- Whole genome
October 18 2019
yacrd and fpa: upstream tools for long-read genome assembly
- Assembly
- Long-read
- Basecalling
- Alignment
- Bioinformatics
March 2 2020
Workflow: mpox virus sequencing
- Assembly
- Amplicons
- DNA
- EPI2ME
- Extraction
- Infectious disease
- Library prep
- Metagenomics
- Microbiology
- MinKNOW
- Outbreak
- Sample prep
- Targeted
- Virus
- Whole genome
- Workflow
November 20 2024
Workflow: large cohort sequencing
- Assembly
- Workflow
- Human genomics
- Clinical research
- Population genomics
- Whole genome
- Structural variation
- Variant calling
- Sample prep
- Library prep
- Methylation
- SNVs
October 12 2023
Wolbachia in the spittlebug Prosapia ignipectus: Variable infection frequencies, but no apparent effect on host reproductive isolation
- Assembly
- Microbiology
- Whole genome
- DNA
- gDNA
- Identification
- Long-read
- Animal
February 25 2021
Whole plastid genome-based phylogenomics supports an inner placement of the O. insectifera group rather than a basal position in the rapidly diversifying Ophrys genus (Orchidaceae)
- Assembly
- Plant
- Whole genome
- Evolution
- Long-read
- MinION
- gDNA
- DNA
December 16 2020
Whole Human Genome Sequencing Project
- Assembly
- Bioinformatics
- Human genomics
- Whole genome
- MinION
- gDNA
June 20 2019
Whole genome sequencing reveals virulence potentials of Helicobacter pylori strain KE21 isolated from a Kenyan patient with gastric signet ring cell carcinoma
- Assembly
- Microbiology
- Infectious disease
- Clinical research
- Bacteria
- Cancer research
- MinION
- Whole genome
August 29 2020
Whole-genome sequencing in PulseNet foodborne molecular surveillance systems
- Assembly
- Bioinformatics
- Infectious disease
- Microbiology
- London Calling
- MinION
- MinION Mk1B
- GridION
May 24 2024
Whole-genome sequencing of human Enteroviruses from clinical samples by nanopore direct RNA sequencing
- Assembly
- Microbiology
- Virus
- Whole genome
- Direct analysis
- RNA
- cDNA
- MinION
- Clinical research
July 31 2020
Whole genome sequencing of Hepatitis A virus using a PCR-free single-molecule nanopore sequencing approach
- Assembly
- Microbiology
- Virus
- Long-read
- RNA
- cDNA
- Whole genome
- MinION
May 25 2020
Whole genome sequencing of Borrelia miyamotoi isolate Izh-4: reference for a complex bacterial genome
- Assembly
- Microbiology
- Bacteria
- Whole genome
- Long-read
- MinION
January 6 2020
Whole genome sequencing and phylogenetic classification of Tunisian SARS-CoV-2 strains from patients of the Military Hospital in Tunis
- Assembly
- Microbiology
- Infectious disease
- Virus
- Outbreak
- GridION
- RNA
- cDNA
- Whole genome
- Clinical research
- SNVs
- Evolution
October 9 2020
Whole-genome sequencing and comparative genomics analysis of the wild edible mushroom (Gomphus purpuraceus) provide insights into its potential food application and artificial domestication
- Assembly
- Food safety
- Microbiology
- Environment
September 10 2022
White paper: advantages of long reads for genome assembly
- Assembly
- Whole genome
- Human genomics
- Plant
- Microbiology
- Animal
September 7 2021
Whole genome sequencing and assembly of the Asian honey bee Apis dorsata
- Assembly
- Whole genome
- gDNA
- DNA
- MinION
- Long-read
- Animal
December 20 2019
Whole genome sequencing and antibiotic diffusion assays, provide new insight on drug resistance in the genus Pedobacter
- Assembly
- Microbiology
- Bacteria
- AMR
- Whole genome
- MinION
- Environment
- Water testing
- Industrial diagnostics
April 9 2020
Whole-genome sequencing and analysis of the Chinese herbal plant Gelsemium elegans
- Assembly
- GridION
- Whole genome
- Plant
- Agriculture: animal
- gDNA
- DNA
- Long-read
July 26 2019
The whole genome sequence resource of Calonectria ilicicola, the casual pathogen of soybean red crown rot
- Assembly
- GridION
- Microbiology
- Plant
- Whole genome
- gDNA
- DNA
March 8 2021