The performance of nanopore sequencing in rapid detection of pathogens and antimicrobial resistance genes in blood cultures
- AMR
- Infectious disease
- GridION
- Real-time
February 2 2025
Long-read 16S rRNA amplicon sequencing reveals microbial characteristics in patients with colorectal adenomas and carcinoma lesions in Egypt
- 16S
- Microbiome
- Cancer research
- Amplicons
- MinION
February 2 2025
Enhancing nanopore adaptive sampling for PromethION using readfish at scale
- PromethION
- Bioinformatics
- Human genomics
- Targeted
- Adaptive sampling
- Structural variation
January 30 2025
Rapid and accurate demultiplexing of direct RNA nanopore sequencing datasets with SeqTagger
- Bioinformatics
- RNA
- MinION
- PromethION
- Scalable
January 29 2025
Clinical performance of real-time nanopore metagenomic sequencing for rapid identification of bacterial pathogens in cerebrospinal fluid
- Infectious disease
- 16S
- Amplicons
- AMR
- EPI2ME
- Real-time
January 28 2025
The novel HLA-C*03:678 allele identified using nanopore sequencing
- Human genomics
- Phasing
- MinION
- Long-read
January 26 2025
Realfreq: real-time base modification analysis for nanopore sequencing
- Bioinformatics
- Methylation
- MinION
- P2 Solo
- Epigenetics
January 26 2025
Webinar in French - Préparer l’avenir de la génomique microbienne
- Microbiology
- Microbiome
- Infectious disease
- Webinar
January 21 2025
Imputation of structural variants using a multi-ancestry long-read sequencing panel enables identification of disease associations
- Human genomics
- Structural variation
- PromethION
- Long-read
January 20 2025
Evaluation of a next generation sequencing assay for Hepatitis B antiviral drug resistance on the Oxford Nanopore system
- Infectious disease
- Amplicons
- GridION
- Virus
- AMR
January 15 2025
Contaminating manufacturing plasmids and disrupted vector genomes present in liver tissue following adeno-associated virus gene therapy
- Biopharma
- Human genomics
- AAV
- PromethION
- MinKNOW
January 14 2025
Nanopore-based consensus sequencing enables accurate multimodal tumour cell-free DNA profiling
- Cancer research
- cfDNA
- SNVs
- MinION
- PromethION
January 13 2025
Gene expression profiles reveal distinct mechanisms driving chronic obstructive pulmonary disease exacerbations
- Microbiology
- Microbiome
- 16S
- rRNA
- MinION
- EPI2ME
January 13 2025
Clinical evaluation of long-read sequencing-based episignature detection in developmental disorders
- Methylation
- Human genomics
- Clinical research
- Whole genome
- Structural variation
- SNVs
January 10 2025
Cost-effective and flexible preimplantation genetic testing (PGT) using adaptive sampling-based targeted nanopore sequencing (ASTN-seq)
- Human genomics
- Adaptive sampling
- Targeted
- MinION
- MinKNOW
January 10 2025
Nanopore adaptive sampling accurately detects nucleotide variants and improves the characterisation of large-scale rearrangement
- Human genomics
- Cancer research
- Adaptive sampling
- SNVs
- Q20+
- MinION
January 9 2025
High prevalence of reverse transcriptase inhibitors associated resistance mutations among people living with HIV on dolutegravir-based antiretroviral
- Virus
- AMR
- Infectious disease
- GridION
January 7 2025
Diagnostic value of third-generation nanopore sequencing in extrapulmonary tuberculosis
- Infectious disease
- Bacteria
- GridION
January 7 2025
An improved rapid and sensitive long amplicon method for nanopore-based RSV whole genome sequencing
- Virus
- Infectious disease
- Amplicons
- MinION
January 7 2025
Genomic diversity and antimicrobial resistance of Vibrio cholerae isolates from Africa: a PulseNet Africa initiative using nanopore sequencing
- Infectious disease
- AMR
- GridION
- Bacteria
- Outbreak
January 4 2025