Main menu

Oxford Nanopore Support

Support

Subscribe

Can't find the answer you are looking for?

Talk to us using the support function.

Do EPI2ME workflows support barcoded data?

Do EPI2ME workflows support barcoded data?

Most of our workflows do support the parallel analysis of demultiplexed data. If a workflow has a sample sheet parameter, then it does supports such barcoded data. To run with multiple barcodes, you should input a directory that contains subdirectories one for each barcode. Optionally a sample sheet can be included to replace barcodes with sample names in any output files.

eg. input directory structure

├── barcode01
│   ├── reads0.fastq
│   ├── reads1.fastq
│   └── reads2.fastq
├── barcode02
│   ├── reads0.fastq
│   ├── reads1.fastq
│   └── reads2.fastq
└── barcode03
    └── reads0.fastq

Sample sheet files should be laid out according to the MinKNOW sample sheet specification. For EPI2ME Labs workflows a file minimally needs the barcode and sample_id fields:

barcode,sample_id
barcode01,sample01
barcode02,sample02
barcode03,sample03
Back to software FAQs

入門

MinION Starter Packを購入 ナノポア製品の販売 シークエンスサービスプロバイダー グローバルディストリビューター

ナノポア技術

ナノポアの最新ニュースを購読 リソースと発表文献 Nanopore Communityとは

Oxford Nanoporeについて

ニュース 会社沿革 持続可能性 経営陣 メディアリソース & お問い合わせ先 投資家向け パートナー向け Oxford Nanopore社で働く 現在の募集状況 営業上の情報 BSI 27001 accreditationBSI 90001 accreditationBSI mark of trust
Japanese flag