Resources: Documentation

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Data analysis

Articles: London Calling 2024

Software Releases: EPI2ME 24.03-01 Release

How Tos: Mpox Workflow

Articles: Nextflow and Jupyter Labs

How Tos: Influenza Workflow

Articles: The road not taken

How Tos: How to interpret exit codes

How Tos: How to align your data

How Tos: Simulating sequencing datasets

Articles: The first EPI2ME Hackathon

Articles: Querying a VCF file

How Tos: Singularity for Bioinformatics

Articles: A guide to reviewing BAM files

Workflow: Single cell [wf-single-cell]

Workflow: Pore-C [wf-pore-c]

Workflow: Metagenomics [wf-metagenomics]

Workflow: Influenza Typing [wf-flu]

Workflow: Cas9 enrichment [wf-cas9]

Workflow: Basecalling [wf-basecalling]

Workflow: Amplicon [wf-amplicon]

Workflow: Alignment [wf-alignment]

Workflow: 16s [wf-16s]

EPI2ME Frequently Asked Questions

EPI2ME Oxford Nanopore Open Data Project

EPI2ME Troubleshooting Guide

EPI2ME Downloads and resources

EPI2ME Desktop Installation

EPI2ME Workflows

EPI2ME Quick Start