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Compatible products

  • Product title:
    EPISEQ® CS : For Clinical Pathogens Outbreak Monitoring
    Product description:

    EPISEQ® CS performs bacterial typing based on Whole Genome Sequencing data and Multi Resistant Bacteria characterization. It helps to confirms Healthcare-Associated Infections (HAIs) outbreaks early and accurately. It allows to track level of resistance genes within the hospital. It reports decisive data to further investigate a potential outbreak or cluster, thus triggering infection prevention and control (IPC) protocols at an early stage to limit the spread of the outbreak.

    Compatible Oxford Nanopore products:

    Rapid Barcoding Kit 24 V14 (SQK-RBK114.24),

    Rapid Barcoding Kit 96 V14 (SQK-RBK114.96),

    MinKNOW 5.9 (customised with .deb file available upon request),

    EPI2ME (for genome assembly, wf-epiqseq-cs-v0.0.2 available upon request)

    MinION GridION Flow Cell R10.4.1 (FLO-MIN114),

    GridION (GRD-MK1)

    Specific use application:
    Epidemiology
    Territory:
    Worldwide
  • Product title:
    EPISEQ® ID: For Bacterial and Fungal Identification
    Product description:

    EPISEQ® ID is an easy to use web-based application for the identification of bacterial and fungi through their respective 16S and ITS broad range PCR sequences. The application is powered by Oxford Nanopore Technologies (ONT) sequenced data.

    Compatible Oxford Nanopore products:

    MinION GridION Flow Cell R10.4.1 (FLO-MIN114),

    Q-Line MinION GridION Flow Cell R9 (Q-FLO-MIN106D),

    MinION (MIN-101B),

    GridION (GRD-MK1),

    GridION Q (Q-GRD-MK1)

    Specific use application:
    Clinical microbiology
    Territory:
    Worldwide

    Research Use Only

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