Resource Centre
218 results
Workflow: single-cell transcriptomics
- Single cell
- Transcriptome
- PromethION
- Cancer research
- Clinical research
- cDNA
- Workflow
- Human genomics
- Splice variation
- Gene fusions
- Gene expression
- Kits
February 20 2024
In Vivo Validation of Alternative FDXR Transcripts in Human Blood in Response to Ionizing Radiation
- Human genomics
- Transcriptome
- Isoforms
- Gene expression
- Long-read
- RNA
- cDNA
- PromethION
November 13 2020
Varicella-zoster virus VLT-ORF63 fusion transcript induces broad viral gene expression during reactivation from neuronal latency
- Microbiology
- Virus
- Gene expression
- cDNA
- RNA
- Transcriptome
- Infectious disease
December 10 2020
Using nanopore RNA-Seq to HLA genotype and correlate donor HLA expression with flow cytometric crossmatch results
- Clinical research
- Human genomics
- Immunology
- RNA
- cDNA
- Gene expression
- Transcriptome
- Isoforms
- MinION
October 24 2019
Using direct RNA nanopore sequencing to deconvolute viral transcriptomes
- Microbiology
- Virus
- Protocols
- Direct analysis
- RNA
- cDNA
- Transcriptome
- Gene expression
April 7 2020
Unraveling gene expression patterns in pediatric germ cell tumors: a nanopore sequencing approach
- Cancer research
- Bioinformatics
- MinION
- Gene expression
- Transcriptomics
September 17 2024
Unique molecular identifier-based high-resolution HLA typing and transcript quantitation using long-read sequencing
- Clinical research
- Human genomics
- Long-read
- Gene expression
- Amplicons
- Targeted
- RNA
- cDNA
- MinION
June 13 2022
Understanding the binding of multiple transcription factors by base-pair-resolution chromatin accessibility
- Clinical research
- Bioinformatics
- Human genomics
- MinION
- Chromatin conformation
- Epigenetics
- Gene expression
- Targeted
- Whole genome
September 17 2024
Uncovering the full-length extracellular transcriptome in human blood plasma using long-read cDNA sequencing
- Cancer research
- Gene expression
- Transcriptome
May 28 2022
Transposable element expression at unique loci in single cells with CELLO-seq
- Single cell
- Transcriptome
- Long-read
- Human genomics
- RNA
- cDNA
- Gene expression
- MinION
October 2 2020
Transcriptome profiling for precision cancer medicine using shallow nanopore cDNA sequencing
- RNA
- Transcriptome
- Gene expression
- Cancer research
- Oncology
- Long-read
- Bioinformatics
- MinION
February 9 2023
Transcriptional neighborhoods regulate transcript isoform lengths and expression levels
- MinION
- RNA
- Gene expression
- Long-read
- Transcriptome
- Splice variation
- Synthetic
- Microbiology
- Direct analysis
March 3 2022
Transcriptional and epi-transcriptional dynamics of SARS-CoV-2 during cellular infection
- Microbiology
- Virus
- Infectious disease
- MinION
- Transcriptome
- Gene expression
- RNA
- cDNA
- Epigenetics
- Long-read
December 22 2020
Trans-NanoSim characterizes and simulates nanopore RNA-seq data
- RNA
- cDNA
- Transcriptome
- Gene expression
- Bioinformatics
October 10 2019
Time-course profiling of bovine alphaherpesvirus 1.1 transcriptome using multiplatform sequencing
- Microbiology
- Virus
- Transcriptome
- Long-read
- Infectious disease
- Isoforms
- Gene expression
- RNA
- cDNA
- Direct analysis
- MinION
- Agriculture: animal
November 24 2020
Tim Mercer: Improving the precision of nanopore sequencing with a synthetic human genome
- Nanopore Community Meeting
- DNA
- RNA
- Human genomics
- Whole genome
- Gene expression
December 19 2018
Temporary adhesion of the proseriate flatworm Minona ileanae
- Whole genome
- Assembly
- MinION
- Transcriptome
- Gene expression
- gDNA
- Animal
September 9 2019
A technology-agnostic long-read analysis pipeline for transcriptome discovery and quantification
- Transcriptome
- Gene expression
- Bioinformatics
June 18 2019
TALC: Transcription-Aware Long Read Correction
- Transcriptome
- Gene expression
- Long-read
- RNA
- cDNA
- Isoforms
- Bioinformatics
January 11 2020
Swan: a library for the analysis and visualization of long-read transcriptomes
- Bioinformatics
- Transcriptome
- Gene expression
- Isoforms
- Long-read
September 29 2020