Resource Centre
39 results
Using nanopore RNA-Seq to HLA genotype and correlate donor HLA expression with flow cytometric crossmatch results
- Clinical research
- Human genomics
- Immunology
- RNA
- cDNA
- Gene expression
- Transcriptome
- Isoforms
- MinION
October 24 2019
Using de novo assembly to identify structural variation of complex immune system gene regions
- Human genomics
- Long-read
- Whole genome
- Assembly
- Variant calling
- Structural variation
- gDNA
- DNA
- PromethION
- Immunology
February 4 2021
Two-field resolution on-call HLA typing for deceased donors using nanopore sequencing
- Immunology
- MinION
- Human genomics
July 30 2022
Targeted sequencing of the entire blood group genome by adaptive sampling
- Phasing
- Variant calling
- Immunology
- London Calling
May 24 2024
Supplementation of a lacto-fermented rapeseed-seaweed blend promotes gut microbial- and gut immune-modulation in weaner piglets
- Microbiology
- Microbiome
- 16S
- DNA
- Long-read
- Agriculture: animal
- Immunology
- MinION
- Targeted
- Amplicons
- Identification
- Animal
September 23 2020
Shining a light on the FCGR locus; genomic analysis of germline and somatic lesions
- Cancer research
- Epigenetics
- Gene expression
- Human genomics
- Immunology
- SNVs
- Phasing
- Structural variation
- Targeted
- Long-read
- Assembly
- MinION
- GridION
May 28 2022
RNA part I: RNA seq with Oxford Nanopore Technologies: direct RNA
- Transcriptome
- RNA
- cDNA
- Immunology
- Direct analysis
December 31 2020
Retention of CD19 intron 2 contributes to CART-19 resistance in leukemias with subclonal frameshift mutations in CD19
- Cancer research
- Clinical research
- Human genomics
- DNA
- Structural variation
- Targeted
- Isoforms
- Immunology
- RNA
- cDNA
- Direct analysis
- MinION
- Long-read
October 7 2019
Rapid, highly accurate and cost‐effective open‐source simultaneous complete HLA typing & phasing of Class I & II alleles using nanopore sequencing
- Human genomics
- Clinical research
- Targeted
- Amplicons
- Phasing
- MinION
- Long-read
- Immunology
- DNA
- Variant calling
May 18 2020
Precision immunology in transplant: paving the way to operational tolerance
- Cancer research
- Clinical
- Immunology
- Transcriptomics
- Infectious disease
- Metagenomics
- Microbiome
- London Calling
May 24 2024
NCM 2022: NAb-seq: an accurate, rapid, and cost-effective method for antibody long-read sequencing in hybridoma cell lines and single B cells
- Bioinformatics
- Single cell
- Nanopore Community Meeting
- Immunology
- Long-read
December 7 2022
NCM 2022: Method development for multiplex, In-Situ, and real-time detection of herpesvirus reactivation in spaceflight crews using nanopore sequencing
- Immunology
- Infectious disease
- Microbiology
- MinION
- Nanopore Community Meeting
December 7 2022
NAb-seq: an accurate, rapid, and cost-effective method for antibody long-read sequencing in hybridoma cell lines and single B cells
- Immunology
- Single cell
August 13 2022
A long road/read to rapid high-resolution HLA typing: The nanopore perspective
- Immunology
- Long-read
- Human genomics
- Clinical research
May 1 2020
Long-read sequencing to interrogate strain-level variation among adherent-invasive Escherichia coli isolated from human intestinal tissue
- Microbiology
- Clinical research
- Immunology
- Long-read
- Targeted
- Amplicons
- 16S
- gDNA
- DNA
- Assembly
- Whole genome
- MinION
- GridION
March 10 2020
London Calling 2024 technology update
- Adaptive sampling
- Assembly
- Automation
- Basecalling
- Bioinformatics
- Cancer research
- Chromatin conformation
- Data release
- Data storage
- Development
- Direct analysis
- DNA
- EPI2ME
- Epigenetics
- Flongle
- Flow cell
- Gene expression
- Gene fusions
- GridION
- GridION Q
- High-throughput
- Human genomics
- Identification
- Immunology
- Industrial diagnostics
- Infectious disease
- Isoforms
- Kits
- London Calling
- Long-read
- Methylation
- Microbiology
- Microbiome
- MinION
- MinION Mk1B
- MinION Mk1D
- MinKNOW
- Nanopore Community
- Oncology
- Outbreak
- Phasing
- Plasmid
- Portable
- PromethION
- PromethION 2 Integrated
- Q20+
- Q-Line
- Real-time
- RNA
- Short-read
- SNVs
- Splice variation
- Structural variation
- TurBOT
- 16S
May 24 2024
Lineage and spatial mapping of glioblastoma-associated immunity
- Immunology
- RNA
- cDNA
- MinION
- Neuroscience
- Gene expression
June 2 2020
Understanding cancer epigenetics, immunogenetics, and energetics
- Bioinformatics
- Cancer research
- Chromatin conformation
- Epigenetics
- Gene expression
- Human genomics
- Immunology
- Infectious disease
- Splice variation
- Targeted
- Transcriptome
- Long-read
- Whole genome
- GridION
- EPI2ME
- London Calling
May 20 2022
How to load a Flongle Flow Cell
- London Calling
- Animal
- Microbiology
- Bioinformatics
- Cancer research
- Chromatin conformation
- Clinical research
- Environment
- Epigenetics
- Gene fusions
- Gene expression
- Human genomics
- Identification
- Immunology
- Infectious disease
- Metagenomics
- Microbiome
- Plant
- Population genomics
- Reproductive medicine
- Transcriptome
- Flongle
May 20 2022
De novo assembly of immunoglobulin loci linked to full-length single-cell transcriptome of antigen-specific plasmablasts
- Assembly
- Bioinformatics
- Gene expression
- Human genomics
- Immunology
- Infectious disease
- Microbiology
- Single cell
- Targeted
- GridION
- PromethION
- Long-read
- London Calling
May 20 2022