Resource Centre
)
Yaniv Erlich: A vision for Ubiquitous Sequencing
- Monitoring
- Real-time
- WIMP
- MinION
- Water testing
- Forensics
January 1 2014
)
Virtual Nanopore Day, Australia. Cancer research with nanopore sequencing
- Monitoring
- MinION
- PromethION
- GridION
- VolTRAX
- SmidgION
November 25 2020
)
Using a mobile nanopore sequencing lab for end-to-end genomic surveillance of Plasmodium falciparum: a feasibility study
- Monitoring
- Portable
- Microbiology
February 1 2024
)
Use of Unamplified RNA/cDNA–Hybrid Nanopore Sequencing for Rapid Detection and Characterization of RNA Viruses
- Monitoring
- Microbiology
- MinION
- RNA
- cDNA
- DNA
April 9 2016
)
The use of Oxford Nanopore native barcoding for complete genome assembly
- Monitoring
- MinION
- Microbiology
- Long-read
- Portable
- Whole genome
December 31 2016
)
Towards a genomics-informed, real-time, global pathogen surveillance system
- Monitoring
- Outbreak
- Infectious disease
- Portable
- MinION
- Microbiology
November 13 2017
)
Sustained detection of type 2 poliovirus in London sewage between February and July, 2022, by enhanced environmental surveillance
- Monitoring
- Microbiology
- Infectious disease
- Long-read
- MinION
- Amplicons
October 12 2022
)
Surveillance of Ebola in Guinea using the MinION – the story
- Monitoring
- Direct analysis
- Real-time
- MinION
- Microbiology
- Outbreak
April 11 2016
)
Stability of SARS-CoV-2 Phylogenies
- Monitoring
- Microbiology
- Virus
- Infectious disease
- Whole genome
- Outbreak
June 9 2020
)
Spike mutation pipeline reveals the emergence of a more transmissible form of SARS-CoV-2
- Monitoring
- Microbiology
- Virus
- Outbreak
- Whole genome
- Variant calling
April 30 2020
)
Rapid SARS-CoV-2 whole genome sequencing for informed public health decision making in the Netherlands
- Monitoring
- Microbiology
- Virus
- Outbreak
- Infectious disease
- MinION
April 25 2020
)
Rapid nanopore-based DNA sequencing protocol of antibiotic-resistant bacteria for use in surveillance and outbreak investigation
- Monitoring
- Microbiology
- Outbreak
- Protocols
- AMR
- Identification
April 22 2021
)
Rapid metagenomics analysis of EMS vehicles for monitoring pathogen load using nanopore DNA sequencing
- Monitoring
- Environment
- Microbiology
- Microbiome
- AMR
- DNA
July 24 2019
Presymptomatic SARS-CoV-2 infections and transmission in a skilled nursing facility
- Monitoring
- Microbiology
- Virus
- Infectious disease
- Whole genome
- Outbreak
April 24 2020
)
Oxford nanopore long-read sequencing enables the generation of complete bacterial and plasmid genomes without short-read sequencing
- Monitoring
- Long-read
- Assembly
- Infectious disease
- Variant calling
- Microbiology
May 15 2023
)
Nanopore sequencing in distinguishing between wild-type and vaccine strains of Varicella-Zoster virus
- Monitoring
- Virus
- Microbiology
- Variant calling
- MinION
- SNVs
March 27 2024
)
A Nanopore-based method for generating complete coding region sequences of dengue virus in resource-limited settings
- Monitoring
- MinION
- Virus
- Portable
- Targeted
- Amplicons
December 19 2018
)
Mutations, recombination and insertion in the evolution of 2019-nCoV
- Monitoring
- Infectious disease
- Virus
- RNA
- cDNA
- Whole genome
March 2 2020
)
Monitoring SARS-CoV-2 variants alterations in Nice neighborhoods by wastewater nanopore sequencing
- Monitoring
- Infectious disease
- Outbreak
- Water testing
- PromethION
- Amplicons
July 9 2021
)
Molecular characterization of Newcastle disease viruses isolated from chickens in Tanzania and Ghana
- Monitoring
- Microbiology
- Virus
- MinION
- Variant calling
- SNVs
August 20 2020