Resource Centre
Workflow overview: whole-plasmid sequencing
- Bacteria
- Microbiology
- Biopharma
- Infectious disease
- Plasmid
- DNA
Workflow overview: bacterial isolate sequencing
- Bacteria
- Whole genome
- DNA
- Microbiology
- Infectious disease
- Biopharma
Workflow overview: 16S sequencing
- Bacteria
- 16S
- Food safety
- Environment
- Identification
- Infectious disease
Whole genome sequencing reveals virulence potentials of Helicobacter pylori strain KE21 isolated from a Kenyan patient with gastric signet ring cell carcinoma
- Bacteria
- Microbiology
- Infectious disease
- Clinical research
- Cancer research
- MinION
Whole genome sequencing of Borrelia miyamotoi isolate Izh-4: reference for a complex bacterial genome
- Bacteria
- Microbiology
- Whole genome
- Assembly
- Long-read
- MinION
Whole genome sequencing and antibiotic diffusion assays, provide new insight on drug resistance in the genus Pedobacter
- Bacteria
- Microbiology
- AMR
- Whole genome
- Assembly
- MinION
Whole genome sequence data of Lactobacillus fermentum HFD1, the producer of antibacterial peptides
- Bacteria
- Microbiology
- AMR
- Whole genome
- Assembly
- MinION
Whole genome comparisons of Staphylococcus agnetis isolates from cattle and chickens
- Bacteria
- Agriculture: animal
- Microbiology
- Outbreak
- Environment
- Whole genome
Whole-genome analysis of VREfm isolates with daptomycin resistance using Oxford Nanopore and Illumina sequencing
- Bacteria
- Bioinformatics
- Whole genome
- Clinical research
- Infectious disease
- Microbiology
The wastewater microbiome: A novel insight for COVID-19 surveillance
- Bacteria
- Bioinformatics
- Microbiology
- Microbiome
- Metagenomics
- Infectious disease
Viral and bacterial profiles in endemic influenza A virus infected swine herds using nanopore metagenomic sequencing on tracheobronchial swabs
- Bacteria
- Microbiology
- Infectious disease
- Virus
- Metagenomics
Using SPAdes de novo assembler
- Bacteria
- Assembly
- Bioinformatics
- Metagenomics
- Transcriptome
- Microbiology
Using nanopore sequencing to identify bacterial infection in joint replacements: a preliminary study
- Bacteria
- AMR
- Microbiology
- MinION
- Clinical research
- Real-time
Unlinked rRNA genes are widespread among bacteria and archaea
- Bacteria
- Microbiology
- Microbiome
- Metagenomics
- Environment
- 16S
Unearthing the boreal soil resistome associated with permafrost thaw
- Bacteria
- Microbiology
- Metagenomics
- MinION
- VolTRAX
- Whole genome
Uncovering the microbiome of invasive sympatric European brown hares and European rabbits in Australia
- Bacteria
- 16S
- Targeted
- Amplicons
- DNA
- gDNA
An ultra-sensitive bacterial pathogen and antimicrobial resistance diagnosis workflow using Oxford Nanopore adaptive sampling sequencing method
- Bacteria
- Microbiology
- AMR
- Targeted
- Clinical research
- DNA
Ultra-long reads and ultra-long duplications: What nanopore sequencing is revealing about Bordetella pertussis
- Bacteria
- Microbiology
- Long-read
- MinION
- Whole genome
- gDNA
Two cases of vancomycin-resistant Enterococcus faecium bacteremia with development of daptomycin-resistant phenotype and its detection using Oxford Nanopore sequencing
- Bacteria
- Microbiology
- AMR
- Clinical research
- SNVs
- Variant calling