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Population-based nanopore sequencing of the HIV-1 pangenome to identify drug resistance mutations


HIV-1 drug resistance testing now requires the analysis of multiple segmented genes, meaning that traditional Sanger sequencing is no longer sufficient. Here the authors use nanopore sequencing to construct near-full-length HIV-1 genomes, allowing for comparable detection of drug resistance to Sanger sequencing. As their method is simpler and more comprehensive, the authors suggest that it could be used in clinical settings globally.

Authors: Hirotaka Ode, Masakazu Matsuda, Urara Shigemi, Mikiko Mori, Yoshimi Yamamura, Yoshihiro Nakata, Reiko Okazaki, Mai Kubota, Yuka Setoyama, Mayumi Imahashi, Yoshiyuki Yokomaku, Yasumasa Iwatani

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