chiron - A basecaller for the nanopore sequencer
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- chiron - A basecaller for the nanopore sequencer
Published in GigaScience: "Chiron: Translating nanopore raw signal directly into nucleotide sequence using deep learning"
Using a cnn+rnn+ctc structure to establish a end-to-end basecalling for the nanopore sequencer.
Build with Tensorflow and python 2.7