Main menu

Rapid identification of respiratory pathogens with Oxford Nanopore metagenomics


Image preview of the pathogen metagenomics workflow overview.

Overview

Metagenomic sequencing is a key technique for the identification of potential pathogens without the need for prior knowledge of microbial sample composition, providing important insights for outbreak surveillance to inform public health measures. Oxford Nanopore technology can sequence any fragment length, enabling thorough characterisation of mixed microbial samples.

This workflow overview introduces how to rapidly identify bacterial, fungal, and viral pathogens from respiratory samples using metagenomic sequencing on a MinION or GridION.

In this workflow overview, you will:

  • Find out how streamlined Oxford Nanopore metagenomic sequencing delivers rapid access to data that has the potential to be critical for outbreak control

  • Discover best-practice guidance for the identification of bacterial, fungal, and viral pathogens from respiratory research samples

  • Learn about the end-to-end pathogen metagenomics workflow — from extraction, to library preparation with the Rapid PCR Barcoding Kit, to sequencing on a MinION or GridION, to data analysis for all levels of experience using the EPI2ME platform

入门指南

购买 MinION 启动包 Nanopore 商城 测序服务提供商 全球代理商

纳米孔技术

订阅 Nanopore 更新 资源库及发表刊物 什么是 Nanopore 社区

关于 Oxford Nanopore

新闻 公司历程 可持续发展 领导团队 媒体资源和联系方式 投资者 合作者 在 Oxford Nanopore 工作 职位空缺 商业信息 BSI 27001 accreditationBSI 90001 accreditationBSI mark of trust
Chinese flag