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Scientist using EPI2ME software to analyse sequencing data

Data analysis: for all levels of expertise

Oxford Nanopore provides a wide range of tools to support Oxford Nanopore data analysis. From preconfigured analysis workflows in EPI2ME to the latest cutting-edge tools to make the most of your sequencing runs.

Screenshot of sequencing analysis software

Preconfigured analysis workflows with EPI2ME

  • Suitable for all experience levels via an intuitive desktop app or command line
  • Utilise preconfigured workflows for a wide range of applications
  • Analyse your data anywhere, whether on a laptop, cluster, cloud environment, or Oxford Nanopore device
  • Access results immediately with real-time analysis workflows
  • Build custom workflows and share via the EPI2ME application

For scientists

For bioinformaticians

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Cutting-edge analytical tools

  • Find the latest basecallers and cutting-edge tools in the Oxford Nanopore GitHub repository
  • Access EPI2ME workflows on GitHub or integrate your own code
  • Command-line experience required

Intuitive analysis with EPI2ME

A full suite of data analysis workflows for a wide range of applications.

Datasets

Oxford Nanopore Technologies Open Data provides researchers open access to nanopore sequencing datasets from Oxford Nanopore sequencing hosted by AWS.

Online training

Get started with Oxford Nanopore sequencing data analysis. Learn how in this materclass.


MinKNOW: intuitive software native to all platforms

MinKNOW is the operating system for all of our devices. It performs raw data acquisition and basecalling, with built-in methylation detection. MinKNOW further enables in silico targeted sequencing using adaptive sampling and can be connected to upstream and downstream tools using MinKNOW API.

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