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Scientist using EPI2ME software to analyse sequencing data

Data analysis: for all levels of expertise

Get maximum insights from your nanopore sequencing data with our comprehensive analysis tools — from intuitive, preconfigured workflows in EPI2ME to the latest analysis algorithms.

For scientists

For bioinformaticians

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Datasets

Explore our open-access datasets to test workflows, benchmark performance, and discover richer insights.

End-to-end workflows

View our growing collection of sample-to-answer workflows covering a wide range of sequencing applications.


MinKNOW: intuitive software for every device

MinKNOW is the operating software for all of our devices. It controls sequencing, performs real-time data acquisition and basecalling, and includes built-in gold-standard methylation detection. It also enables in silico targeted sequencing using Adaptive Sampling and can integrate with upstream and downstream tools using MinKNOW API.


Data analysis masterclasses

Analyse_Oxford_Nanopore_sequencing_data_without_specialist_trainingEvent video

How do I analyse my Oxford Nanopore sequencing data without specialist training?

In this beginner-friendly masterclass, discover how to analyse your Oxford Nanopore sequencing data. Find out how basecalling works, the common file formats you’ll encounter, and how to use MinKNOW to set up and monitor your sequencing run. Then, discover how to analyse your data with EPI2ME — no pr
Epigenetics without bisulfite how do I analyse methylation and variants in one goEvent video

Epigenetics without bisulfite: how do I analyse methylation and variants in one go?

With Oxford Nanopore native DNA and RNA sequencing, you can access variants and modifications in one go. In this demo, see how streamlined these workflows are. In this masterclass, discover: • How Oxford Nanopore sequencing is advancing human genomic research • About the techniques available for hum
From_full-length_16S_to_high-resolution_metagenomics_choosing_the_right_microbial_community_workflowEvent video

From full-length 16S to high-resolution metagenomics: how do I choose the right microbial community workflow for my experiment?

In this masterclass, find the right microbial community sequencing workflow to meet your experimental goals. We’ll cover microbial identification from full-length 16S/ITS sequencing through to comprehensive metagenomic assembly. In this masterclass, discover: • How Oxford Nanopore sequencing deliver
Choose_the_right_human_whole-genome_sequencing_workflowEvent video

From speed to scale: how do I choose the right human whole-genome sequencing workflow for my experiment?

In this masterclass, find the right human whole-genome sequencing workflow to meet your experimental goals. We’ll cover whole-genome analysis in just 24 hours through to scaling sequencing for large cohort research. In this masterclass, discover: • How Oxford Nanopore sequencing is advancing human g
Multiomics with one platform how do I see more from my samples with Oxford Nanopore sequencing​Event video

Multiomics with one platform: how do I see more from my samples with Oxford Nanopore sequencing?

DNA and RNA, genomic variants and base modifications, all from a single platform. In this demo, discover how to get multiomic insights from Oxford Nanopore sequencing. In this masterclass, discover: • How to optimise extraction for your experimental goals • Best practices for handling and preserving

Sample prep and sequencing solutions

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