Resource Centre
)
Validation of HPV genotyping by Oxford Nanopore sequencing in FFPE tissues and ThinPrep anal and gynaecological samples
- Virus
- Cancer research
- FFPE
- Amplicons
- MinION
June 4 2025
)
Genomic hotspots in the DENV-2 serotype (E, NS4B, and NS5 genes) are associated with dengue disease severity in the endemic region of India
- Virus
- Infectious disease
- SNVs
- GridION
- Outbreak
April 29 2025
)
An improved rapid and sensitive long amplicon method for nanopore-based RSV whole genome sequencing
- Virus
- Infectious disease
- Amplicons
- MinION
April 28 2025
)
A sensitive sample preparation pipeline for adventitious virus detection using Oxford Nanopore sequencing
- Virus
- Biopharma
- GridION
April 24 2025
)
Re-adenylation by TENT5A enhances efficacy of SARS-CoV-2 mRNA vaccines
- Virus
- Biopharma
- mRNA
- Infectious disease
April 16 2025
)
Nanopore-based hybridisation capture approaches for targeted viral metagenomics and whole-genome sequencing
- Virus
- Infectious disease
- Metagenomics
- Targeted
- GridION
- MinKNOW
April 9 2025
)
)
Multisite long-read sequencing reveals the early contribution of somatic structural variations to HBV-related hepatocellular carcinoma tumorigenesis
- Virus
- Cancer research
- PromethION 24/48
- Structural variation
- SNVs
March 4 2025
)
Comparison of nanopore with Illumina whole genome assemblies of the Epstein-Barr virus in Burkitt lymphoma
- Virus
- Cancer research
- PromethION 24/48
- MinKNOW
- Portable
February 25 2025
)
Structural patterns and transcriptional effects of integrated Epstein-Barr virus revealed by long-read sequencing and RNA-sequencing in NPC
- Virus
- Cancer research
- PromethION 24/48
- Fusion transcript
- Structural variation
February 17 2025
Evaluation of a next generation sequencing assay for Hepatitis B antiviral drug resistance on the Oxford Nanopore system
- Virus
- Infectious disease
- Amplicons
- GridION
- AMR
January 15 2025
)
Gene expression profiles reveal distinct mechanisms driving chronic obstructive pulmonary disease exacerbations
- Virus
- Microbiology
- Microbiome
- 16S
- rRNA
- MinION
January 13 2025
)
High prevalence of reverse transcriptase inhibitors associated resistance mutations among people living with HIV on dolutegravir-based antiretroviral
- Virus
- AMR
- Infectious disease
- GridION
January 7 2025
)
MrHAMER2: high-accuracy long-read RNA sequencing to decode isoform-specific variation in viral transcripts during latency
- Virus
- Splice variation
- Long-read
- Isoforms
- RNA
- SNVs
December 22 2024
)
Rearrangements of viral and human genomes at human papillomavirus integration events and their allele-specific impacts on cancer genome regulation
- Virus
- Cancer research
- Methylation
- PromethION
December 5 2024
)
Antibiotic-mediated selection of randomly mutagenised and cytokine-expressing oncolytic viruses
- Virus
- Biopharma
- Cancer research
- MinION
November 28 2024
)
)
Genomic variability in Zika virus in GBS cases in Colombia
- Virus
- Infectious disease
- MinION Mk1B
- MinKNOW
November 19 2024
)
Case study: delivering ‘unique insights’ into infection with direct RNA sequencing
- Virus
- RNA
- mRNA
- Transcriptome
- Transcriptomics
- Isoforms
November 6 2024
)
An optimised protocol for quality control of gene therapy vectors using nanopore direct RNA sequencing
- Virus
- Direct analysis
- RNA
- Biopharma
- Microbiology
- GridION
October 28 2024