Resource Centre
Publication 
Identifying intra-hospital Norovirus GII transmission using whole-genome sequencing
Publication 
Sensitive, flexible, and affordable serum RNA sequencing for pathogen detection on the Oxford Nanopore platform
Publication 
Contaminating plasmid sequences and disrupted vector genomes in the liver following adeno-associated virus gene therapy
Publication 
Twist-ONT: combining nanopore sequencing with the Twist comprehensive viral research panel
Publication 
Sputum respiratory pathogen genomic surveillance: a practical approach for long-read metagenomic sequencing
Publication 
Whole-genome nanopore sequencing and automatic downstream analysis of respiratory syncytial virus using RSVTyper
Publication Novel multiplex family-wide PCR and nanopore sequencing of amplicons (FP-NSA) approach for surveillance of influenza- and coronaviruses
Publication 
Rapid pan-microbial metagenomics for pathogen detection and personalised therapy in the intensive care unit: a single-centre prospective study
Workflow 
Protocol overview: influenza virus whole-genome sequencing
Publication 
Swine influenza-modified pulmonary microbiota
Publication 
Genomic heterogeneity and lineage-specific beta-lactamases in recurrent Achromobacter bloodstream infection patients
Publication Shallow shotgun metagenomic sequencing of vaginal microbiomes with the Oxford Nanopore technology enables the reliable determination of state types
Publication Characterising the microbial and antimicrobial resistance signatures of hospital-acquired pneumonia using nanopore metagenomic sequencing
Publication 
The Platinum Pedigree: a long-read benchmark for genetic variants
Publication 
Diagnostic performance of metagenomics sequencing for pulmonary fungal infections: a clinical evaluation using the nanopore platform
Publication 
Precise identification of viral–host integration events in HPV-positive cervical cancers by targeted long-read sequencing
Workflow 
Workflow overview: mpox virus sequencing
Publication 
A targeted approach for multiplex detection of respiratory viruses in cases with severe acute respiratory infections by nanopore sequencing
Publication 
Next-generation sequencing methods for sensitive characterisation of Hepatitis B viral genomes: a European multicentre study
Publication 
Amplicon sequencing of pasteurised retail dairy enables genomic surveillance of H5N1 avian influenza virus in United States cattle
