Nanopore Workshop - (Singapore time)
Thu 25th February - Fri 26th February 2021
Online
Due to COVID-19, we are making our training packages available online. Both day 1 and day 2 will comprise of a 3.5 hour online session.
10:00 am (SGT), 25th February 2021: Introduction Workshop
Oxford Nanopore Technogies' experts will provide attendees with a nanopore sequencing overview and case study discussion. A nanopore sequencing demonstration as well as a rapid sequencing control experiment will allow each participant to gain practical hands-on experience of running the MinION/GridION.
The workshop will cover the following:
- Library preparation in groups
- Library loading practice
- Running the MinION/GridION
- Introduction to basecalling and Epi2ME analysis workflows
10:00 am (SGT), 26th February 2021: Data Analysis Overview
Gain practical experience with a 3.5 hour session dedicated to data analysis using Oxford Nanopore Technologies and community developed tools. This workshop will include a comprehensive data analysis overview followed by practical hands-on experience running different analysis workflows. The practical training will cover the following:
- In depth overview of EPI2ME for real-time end-to-end analysis
- Command line tutorial
- Guppy (command, parameters and folder structure)
- Overview of fast5 file format
- Quality and read length distribution plot and filtering
- Mapping to a reference
- De novo assembly and consensus correction
- Methylation detection
Please contact support@nanoporetech.com if you have any questions
**The language for this workshop is English**
Event category:
Nanopore events
Type of Event:
Workshop
Admission:
Registration