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Online Nanopore Workshop - (US time)

Thu 18th March - Fri 19th March 2021

Online

Due to COVID-19, we are making our training packages available online. Both day 1 and day 2 will comprise of a 3.5 hour online session.

12:30 pm (EST), 18th March 2021: Introduction Workshop

Oxford Nanopore Technogies' experts will provide attendees with a nanopore sequencing overview and case study discussion. A nanopore sequencing demonstration as well as a rapid sequencing control experiment will allow each participant to gain practical hands-on experience of running the MinION/GridION.

The workshop will cover the following:

  • Library preparation in groups
  • Library loading practice
  • Running the MinION/GridION
  • Introduction to basecalling and Epi2ME analysis workflows
     

12:30 pm (EST), 19th March 2021: Data Analysis Overview

Gain practical experience with a 3.5 hour session dedicated to data analysis using Oxford Nanopore Technologies and community developed tools. This workshop will include a comprehensive data analysis overview followed by practical hands-on experience running different analysis workflows. The practical training will cover the following:

  • In depth overview of EPI2ME for real-time end-to-end analysis
  • Command line tutorial
  • Guppy (command, parameters and folder structure)
  • Overview of fast5 file format
  • Quality and read length distribution plot and filtering
  • Mapping to a reference
  • De novo assembly and consensus correction
  • Methylation detection

Please contact support@nanoporetech.com if you have any questions

**The language for this workshop is English**

Event category:
Nanopore events

Type of Event:
Workshop

Admission:
Registration