Resource Centre
Video )
Foodborne pathogen surveillance with Oxford Nanopore sequencing
Workflow )
Workflow overview: 16S sequencing
Application note )
Application note: Oxford Nanopore whole-genome sequencing of foodborne pathogens
Workflow Protocol overview: direct-from-colony microbial sequencing (rapid Salmonella serotyping)
Brochure )
Brochure: microbiology and infectious disease research
Publication )
Genomic insights into plasmid mediated AMR genes, virulence factors and mobile genetic elements in raw milk Escherichia coli from Gujarat, India
Case study Case study: combating viral contamination and disease outbreaks at source with rapid, low-cost nanopore sequencing
Case study )
Case study: culture-free, strain-level characterisation of foodborne pathogens using targeted nanopore metagenomics
Publication )
Metabarcoding for authentication of fish species in surimi-based products by Nanopore sequencing
Video )
Advancements in nanopore sequencing for enhanced food safety and quality assurance
Case study )
Case study: species-level profiling of environmental microbiota with high-accuracy full-length nanopore 16S sequencing
Publication )
Detection of Escherichia coli O157:H7 in ground beef using long-read sequencing
Publication )
Evaluation of multiplex nanopore sequencing for Salmonella serotype prediction and antimicrobial resistance gene and virulence gene detection
Publication )
Towards real-time and affordable strain-level metagenomics-based foodborne outbreak investigations using Oxford Nanopore sequencing technologies
Publication )
Whole-genome sequencing and comparative genomics analysis of the wild edible mushroom (Gomphus purpuraceus) provide insights into its potential food application and artificial domestication
Publication Bacterial community development and diversity during the first year of production in a new salmon processing plant
Publication )
The power, potential, benefits, and challenges of implementing high-throughput sequencing in food safety systems
Publication )
Rapid Oxford Nanopore Technologies MinION sequencing workflow for Campylobacter jejuni identification in broilers on site
Publication )
Subtyping evaluation of Salmonella enteritidis using single nucleotide polymorphism and core genome multilocus sequence typing with nanopore reads
Publication )
Democratizing plant genomics to accelerate global food production
